Converting SRA Data to FASTQ and Saving Directly to S3

Question

[Soohyun]

I am currently downloading SRA data stored in AWS S3.

I would like to download SRA data from S3 and convert it to FASTQ format, then save it directly to my own S3 bucket without storing it on a local server. Is there a recommended way to achieve this? I would greatly appreciate any guidance or suggestions.

Thank you in advance for your help.

[GenoMax]

Likely not possible since you can't mount S3 from SRA (I guess this is directly from NCBI?) locally. Not sure if you can stream and pipe the data into a conversion tool.

You could save yourself the hassle and look to see if you can find fastq format files directly on ENA using --> sra-explorer : find SRA and FastQ download URLs in a couple of clicks