converting transcript positions to genomic locations

Question

[baibhu1234]

Hello everyone, I am doing m6A identification analysis on transcript basis as i am mostly interested in the modifications in transcripts. So, i have obtained the sites with their position on their corresponding transcripts (transcript_id, start, end).

but for global representation of the sites, i want to get the global ie. genomic locations (chr, start, end, strand) for each of the sites. I am having a hard time doing this due to the presence of multiple exons and UTRs in transcripts.

is there any tool which can automate the process.

(PS: I am working with a plant species)

[Pierre Lindenbaum]

How to convert Human Ensembl transcript coordinates to GRCh38 ; Convert transcript coordinates to genomic coordinates ; Convert from transcripts coordinates to genomic coordinates in python ; how to get genomic location of transcript positions ; Convert Nm_ Mrna Position Into Corresponding Grch37 Genomic Dna Position? ; ...