Biopython get_terminals() doesn't get all terminals

Question

[khp35]

Hello,

I downloaded the bac120.tree from GTDB. It has 136646 terminals. When I run

tree = Phylo.read("bac120.tree", "newick")

tips = tree.get_terminals()

I get a list of size one, which is one of the 136646 terminals. I was hoping to get a list of all terminals.

What am I doing wrong?

Thanks and best regards,

[Pierre Lindenbaum]

welcome back to biostars . 6 years ago you asked a question , you got answer but you left no comment / upvote / validation : Algal vs bacterial 16s chloroplast . It would be nice if you could comment/validate

Answer 1

[khp35]

Sorry, my bad. The tree wasn't imported correctly. It works now.