In addition to Genewiz and Novogene, consider CD Genomics for their Ribo-seq services, including wet-lab and analysis pipelines. They offer flexible options for ribosome profiling.
Eclipsebio's eRibo Pro provides a full-service ribosome profiling solution with sequencing and data analysis, potentially at competitive rates. It's designed to streamline the process for researchers.
Immagina Biotechnology has a combined kit and service for RiboSeq, including reagents, sequencing, and data analysis—similar to your colleague's recommendation. This could be worth quoting for bulk samples.
EIRNA Bio offers high-throughput Ribo96 profiling, focusing on translational insights across multiple samples. They emphasize patient-specific differences.
Creative Biolabs provides advanced ribosome profiling with NGS, giving snapshots of active translation.
University cores like those at major institutions (search "university ribosome profiling core") often handle external samples, though analysis may vary.
For pricing, contact providers directly as rates fluctuate; some may undercut $2000/sample for bundles.
Kevin
Were https://www.genewiz.com/ and/or Novogene https://www.novogene.com/ on your list already? Several university sequencing core labs may also do external customer samples, though they may not always offer analysis to go with sequencing. You can find examples by searching.