I have some problems with mapping transcription factor matrix id (from TRANSFAC and JASPAR) to gene symbols.
V$MAFB_01 -> gene symbols?
V$CREBP1_Q2 -> gene symbols?
V$HNF1_02 -> gene symbols?
What I ultimately wanna do is checking the expression values of interest transcription factor in expression data.
My expression data identifies gene by gene symbols.
Previously, I obtained interest transcription factors matrices that show significant probability of binding given sequence.
But, I have no idea what to do for mapping those matrices to gene set.
I have found site below, but it provide only cancer-related TF families. http://rulai.cshl.edu/TRED/TFlist.htm
Could you provide any relevant info about these issues?
Thanks a lot!