Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : comments
0
votes
0
replies
298
views
Comment: Comment: Kallisto to tximport to deseq2
3 days ago by bioinfo ▴ 150
0
votes
0
replies
318
views
Comment: Comment: Question about assigning gene names, tximport and DESeq2
4 weeks ago by bioinfo ▴ 150
0
votes
0
replies
1.5k
views
Comment: Comment: How to use harmony with scanpy?
3 months ago by bioinfo ▴ 150
0
votes
0
replies
797
views
Comment: Comment: Why does assigning genes with biomart give me different values than using a tran
7 months ago by bioinfo ▴ 150
0
votes
0
replies
555
views
Comment: Comment: How can I import an unindexed human gtf file in IGV?
10 months ago by bioinfo ▴ 150
0
votes
0
replies
1.0k
views
Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
11 months ago by bioinfo ▴ 150
0
votes
1
reply
1.0k
views
Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
11 months ago by bioinfo ▴ 150
0
votes
1
reply
1.0k
views
Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
11 months ago by bioinfo ▴ 150
0
votes
1
reply
727
views
Comment: Comment: Where are the illumina adapters on Trimmomatic take from?
11 months ago by bioinfo ▴ 150
0
votes
0
replies
797
views
Comment: Comment: Why does assigning genes with biomart give me different values than using a tran
12 months ago by bioinfo ▴ 150
0
votes
1
reply
1.7k
views
Comment: Comment: How should I make kallisto indexes?
12 months ago by bioinfo ▴ 150
0
votes
0
replies
658
views
Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
13 months ago by bioinfo ▴ 150
0
votes
0
replies
832
views
Comment: Comment: How to row normalize a matrixplot?
13 months ago by bioinfo ▴ 150
0
votes
0
replies
924
views
Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
13 months ago by bioinfo ▴ 150
0
votes
1
reply
924
views
Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
13 months ago by bioinfo ▴ 150
0
votes
1
reply
1.4k
views
Comment: Comment: How does kallisto handle multi mapped reads?
14 months ago by bioinfo ▴ 150
0
votes
1
reply
1.4k
views
Comment: Comment: How does kallisto handle multi mapped reads?
14 months ago by bioinfo ▴ 150
0
votes
1
reply
1.7k
views
Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
18 months ago by bioinfo ▴ 150
0
votes
1
reply
1.7k
views
Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
18 months ago by bioinfo ▴ 150
0
votes
1
reply
1.7k
views
Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
18 months ago by bioinfo ▴ 150
0
votes
0
replies
1.3k
views
Comment: Comment: Why am I getting different results with kallisto?
18 months ago by bioinfo ▴ 150
0
votes
1
reply
1.3k
views
Comment: Comment: Why am I getting different results with kallisto?
18 months ago by bioinfo ▴ 150
0
votes
1
reply
1.3k
views
Comment: Comment: Why am I getting different results with kallisto?
18 months ago by bioinfo ▴ 150
0
votes
1
reply
964
views
Comment: Comment: Are truseq adapter sequences picked up by FASTQC?
18 months ago by bioinfo ▴ 150
0
votes
0
replies
1.4k
views
Comment: Comment: How to assign gene names after kallisto when I add GFP?
19 months ago by bioinfo ▴ 150
0
votes
1
reply
1.4k
views
Comment: Comment: How to assign gene names after kallisto when I add GFP?
19 months ago by bioinfo ▴ 150
0
votes
0
replies
4.8k
views
Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
0
votes
0
replies
4.8k
views
Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
0
votes
1
reply
4.8k
views
Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
0
votes
1
reply
4.8k
views
Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
0
votes
0
replies
1.0k
views
Comment: Comment: How to calculate GC content of reads that mapped to a specific gene?
20 months ago by bioinfo ▴ 150
0
votes
0
replies
1.5k
views
Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
0
votes
1
reply
1.5k
views
Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
0
votes
0
replies
1.5k
views
Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
0
votes
1
reply
1.5k
views
Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
0
votes
0
replies
1.8k
views
Comment: Comment: Questions about per base sequence quality and GC content.
21 months ago by bioinfo ▴ 150
0
votes
1
reply
1.8k
views
Comment: Comment: Questions about per base sequence quality and GC content.
21 months ago by bioinfo ▴ 150
0
votes
0
replies
2.1k
views
Comment: Comment: How to choose threshold for scrublet?
21 months ago by bioinfo ▴ 150
0
votes
0
replies
1.8k
views
Comment: Comment: Questions about per base sequence quality and GC content.
21 months ago by bioinfo ▴ 150
0
votes
0
replies
1.2k
views
Comment: Comment: How to assign gene names to ensembl IDs if species not in Biomart
21 months ago by bioinfo ▴ 150
0
votes
2
replies
4.0k
views
Comment: Comment: Why do I need to sort and index gtf file for IGV?
22 months ago by bioinfo ▴ 150
0
votes
0
replies
1.0k
views
Comment: Comment: Where can I find the --chromosomes file for kallisto?
22 months ago by bioinfo ▴ 150
0
votes
0
replies
1.2k
views
Comment: Comment: Does adding reads cause batch effects?
23 months ago by bioinfo ▴ 150
0
votes
1
reply
1.2k
views
Comment: Comment: Does adding reads cause batch effects?
23 months ago by bioinfo ▴ 150
1
vote
0
replies
2.1k
views
Comment: Comment: How to demultiplex data with totalseq B antibodies using hashsolo?
2.1 years ago by bioinfo ▴ 150
0
votes
1
reply
2.1k
views
Comment: Comment: How to demultiplex data with totalseq B antibodies using hashsolo?
2.1 years ago by bioinfo ▴ 150
0
votes
0
replies
921
views
Comment: Comment: Do I need to specify the introns on the gtf file for cellranger?
2.1 years ago by bioinfo ▴ 150
0
votes
0
replies
2.2k
views
Comment: Comment: How to add gene entry to gtf file?
2.2 years ago by bioinfo ▴ 150
0
votes
0
replies
2.2k
views
Comment: Comment: How to add gene entry to gtf file?
2.2 years ago by bioinfo ▴ 150
0
votes
2
replies
2.2k
views
Comment: Comment: How to add gene entry to gtf file?
2.2 years ago by bioinfo ▴ 150
77 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6