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Comment: Comment: Question about assigning gene names, tximport and DESeq2
14 days ago by bioinfo ▴ 150
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1.3k
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Comment: Comment: How to use harmony with scanpy?
10 weeks ago by bioinfo ▴ 150
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767
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Comment: Comment: Why does assigning genes with biomart give me different values than using a tran
6 months ago by bioinfo ▴ 150
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523
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Comment: Comment: How can I import an unindexed human gtf file in IGV?
9 months ago by bioinfo ▴ 150
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994
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Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
10 months ago by bioinfo ▴ 150
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994
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Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
10 months ago by bioinfo ▴ 150
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994
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Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
10 months ago by bioinfo ▴ 150
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703
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Comment: Comment: Where are the illumina adapters on Trimmomatic take from?
11 months ago by bioinfo ▴ 150
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767
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Comment: Comment: Why does assigning genes with biomart give me different values than using a tran
11 months ago by bioinfo ▴ 150
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1.6k
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Comment: Comment: How should I make kallisto indexes?
12 months ago by bioinfo ▴ 150
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629
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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
12 months ago by bioinfo ▴ 150
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807
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Comment: Comment: How to row normalize a matrixplot?
12 months ago by bioinfo ▴ 150
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888
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Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
12 months ago by bioinfo ▴ 150
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888
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Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
12 months ago by bioinfo ▴ 150
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1.3k
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Comment: Comment: How does kallisto handle multi mapped reads?
14 months ago by bioinfo ▴ 150
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1.3k
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Comment: Comment: How does kallisto handle multi mapped reads?
14 months ago by bioinfo ▴ 150
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1.7k
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Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
17 months ago by bioinfo ▴ 150
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1.7k
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Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
17 months ago by bioinfo ▴ 150
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1.7k
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Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
17 months ago by bioinfo ▴ 150
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1.2k
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Comment: Comment: Why am I getting different results with kallisto?
17 months ago by bioinfo ▴ 150
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1
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1.2k
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Comment: Comment: Why am I getting different results with kallisto?
17 months ago by bioinfo ▴ 150
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1
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1.2k
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Comment: Comment: Why am I getting different results with kallisto?
17 months ago by bioinfo ▴ 150
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1
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941
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Comment: Comment: Are truseq adapter sequences picked up by FASTQC?
17 months ago by bioinfo ▴ 150
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1.4k
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Comment: Comment: How to assign gene names after kallisto when I add GFP?
18 months ago by bioinfo ▴ 150
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1.4k
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Comment: Comment: How to assign gene names after kallisto when I add GFP?
18 months ago by bioinfo ▴ 150
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4.7k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
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4.7k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
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1
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4.7k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
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1
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4.7k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
19 months ago by bioinfo ▴ 150
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1.0k
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Comment: Comment: How to calculate GC content of reads that mapped to a specific gene?
19 months ago by bioinfo ▴ 150
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1.4k
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
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1
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1.4k
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
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1.4k
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
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1
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1.4k
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
20 months ago by bioinfo ▴ 150
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1.8k
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Comment: Comment: Questions about per base sequence quality and GC content.
20 months ago by bioinfo ▴ 150
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1
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1.8k
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Comment: Comment: Questions about per base sequence quality and GC content.
20 months ago by bioinfo ▴ 150
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2.0k
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Comment: Comment: How to choose threshold for scrublet?
20 months ago by bioinfo ▴ 150
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1.8k
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Comment: Comment: Questions about per base sequence quality and GC content.
20 months ago by bioinfo ▴ 150
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1.1k
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Comment: Comment: How to assign gene names to ensembl IDs if species not in Biomart
20 months ago by bioinfo ▴ 150
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2
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3.9k
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Comment: Comment: Why do I need to sort and index gtf file for IGV?
21 months ago by bioinfo ▴ 150
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1.0k
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Comment: Comment: Where can I find the --chromosomes file for kallisto?
21 months ago by bioinfo ▴ 150
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1.2k
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Comment: Comment: Does adding reads cause batch effects?
22 months ago by bioinfo ▴ 150
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1
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1.2k
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Comment: Comment: Does adding reads cause batch effects?
23 months ago by bioinfo ▴ 150
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2.1k
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Comment: Comment: How to demultiplex data with totalseq B antibodies using hashsolo?
2.0 years ago by bioinfo ▴ 150
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2.1k
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Comment: Comment: How to demultiplex data with totalseq B antibodies using hashsolo?
2.0 years ago by bioinfo ▴ 150
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904
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Comment: Comment: Do I need to specify the introns on the gtf file for cellranger?
2.0 years ago by bioinfo ▴ 150
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2.1k
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Comment: Comment: How to add gene entry to gtf file?
2.2 years ago by bioinfo ▴ 150
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2.1k
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Comment: Comment: How to add gene entry to gtf file?
2.2 years ago by bioinfo ▴ 150
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2
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2.1k
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Comment: Comment: How to add gene entry to gtf file?
2.2 years ago by bioinfo ▴ 150
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1.7k
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Comment: Comment: How to interpret dotplot from enrichment analysis with gseapy?
2.2 years ago by bioinfo ▴ 150
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