User: sutturka

gravatar for sutturka
sutturka50
Reputation:
50
Status:
New User
Location:
USA
Last seen:
9 hours ago
Joined:
3 years, 1 month ago
Email:
s************@gmail.com

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Posts by sutturka

<prev • 5 results • page 1 of 1 • next >
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Comment: C: Career in Bioinformatics
... I second "Masters in bioinformatics" suggestion considering your expertise in programming. ...
written 6 weeks ago by sutturka50
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Answer: A: Career in Bioinformatics
... +1 for first completing your four years degree before seeking programs abroad. I agree that there are limited bioinformatics opportunities in India, especially related to research. But if you have good coding skills, then you can think about joining an IT company (several of them work on biological ...
written 6 weeks ago by sutturka50
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Comment: C: How basemean/basemeanA/basemeanB and log2foldchange are counted in DESeq2 ?
... This is really very helpful information. Can you please suggest how to calculate the log2fc or fc using the values from mcols(dds) output. I calculated first and second basemean as suggested and log2fc by log(basemean2/basemean1). However, it does not match with DeSeq2 output value. 1. MLE_Interce ...
written 3 months ago by sutturka50
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Answer: A: Extract Cds Fastas From A Gff Annotation + Reference Sequence
... Try bedtools getfasta : http://bedtools.readthedocs.io/en/latest/content/tools/getfasta.html ...
written 6 months ago by sutturka50
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Answer: A: Masurca Error With Illumina Assembly
... Hi, I contacted developers regarding this and they suggested that read_names does not matter during pre-processing of data. He suggested me to perform a test with my fastq file: > file -b -i jumps.A.fastq This gave me the results like: text/x-python; charset=us-ascii I emailed results t ...
written 3.1 years ago by sutturka50

Latest awards to sutturka

Scholar 6 weeks ago, created an answer that has been accepted. For A: Career in Bioinformatics
Teacher 6 weeks ago, created an answer with at least 3 up-votes. For A: Career in Bioinformatics

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