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217
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Answer:
Answer: Correcting for continuous covariates before WGCNA
6 days ago by
LChart
2.6k
0
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0
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189
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Comment:
Comment: merging structural variants from various callers into one vcf file (long read se
6 days ago by
LChart
2.6k
1
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0
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220
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Answer:
Answer: WGCNA module-trait correlation heatmap has horizontal streaks -- how to interpre
6 days ago by
LChart
2.6k
0
votes
1
reply
860
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Comment:
Comment: Accuracy of Methods for Gene Variant Detection and Quantification: Kallisto Pseu
13 days ago by
LChart
2.6k
0
votes
0
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287
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Answer:
Answer: How to make a volcano plot including all features in a Seurat Object?
18 days ago by
LChart
2.6k
0
votes
0
replies
386
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Comment:
Comment: UMI in seqc2 dataset Burning Rock data
21 days ago by
LChart
2.6k
0
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0
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274
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Comment:
Comment: What burden testing software scales to large cohorts?
22 days ago by
LChart
2.6k
0
votes
2
replies
274
views
What burden testing software scales to large cohorts?
burden
test
rare
variants
SKAT
22 days ago by
LChart
2.6k
1
vote
1
reply
585
views
Answer:
Answer: t-test to check if the cancer samples are significantly different than the norma
23 days ago by
LChart
2.6k
0
votes
1
reply
386
views
Comment:
Comment: UMI in seqc2 dataset Burning Rock data
23 days ago by
LChart
2.6k
1
vote
0
replies
490
views
Comment:
Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
23 days ago by
LChart
2.6k
0
votes
0
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376
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Comment:
Comment: BCL2 fusions not detected in RNA level
24 days ago by
LChart
2.6k
2
votes
0
replies
249
views
Answer:
Answer: Question: Why residuals can be used as new input in bioinformatic analysis?
24 days ago by
LChart
2.6k
1
vote
2
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490
views
Answer:
Answer: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
25 days ago by
LChart
2.6k
2
votes
0
replies
420
views
Comment:
Comment: Transformation of Log2FC to average logFC
26 days ago by
LChart
2.6k
1
vote
2
replies
420
views
Answer:
Answer: Transformation of Log2FC to average logFC
26 days ago by
LChart
2.6k
1
vote
1
reply
389
views
Answer:
Answer: ANOVA or linear regression
27 days ago by
LChart
2.6k
1
vote
0
replies
259
views
Answer:
Answer: BD Rhapsody software - single cell seq
27 days ago by
LChart
2.6k
0
votes
1
reply
1.4k
views
Comment:
Comment: activity of unloaded/unassembled Tn5
28 days ago by
LChart
2.6k
1
vote
1
reply
593
views
Comment:
Comment: Variant calling using samtools
4 weeks ago by
LChart
2.6k
8
votes
1
reply
365
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Answer:
Answer: Wald's test in DESeq2
4 weeks ago by
LChart
2.6k
1
vote
1
reply
1.5k
views
Comment:
Comment: Extract Reads From A Bam file according to gene components `5'UTR, 1st exon, 1st
5 weeks ago by
LChart
2.6k
1
vote
0
replies
332
views
Comment:
Comment: SKAT vs SIMES methods
5 weeks ago by
LChart
2.6k
1
vote
1
reply
332
views
Answer:
Answer: SKAT vs SIMES methods
5 weeks ago by
LChart
2.6k
1
vote
1
reply
333
views
Comment:
Comment: kinship coefficient negative in multi-sample VCF from exome sequencing
6 weeks ago by
LChart
2.6k
0
votes
1
reply
449
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Comment:
Comment: SCVI problem
6 weeks ago by
LChart
2.6k
0
votes
1
reply
449
views
Comment:
Comment: SCVI problem
6 weeks ago by
LChart
2.6k
1
vote
1
reply
442
views
Answer:
Answer: How to "guess" the transformation based on already-transformed, "normalized coun
7 weeks ago by
LChart
2.6k
1
vote
1
reply
266
views
Comment:
Comment: how to deal with "The number of covariates exceeds the number of samples" on mat
7 weeks ago by
LChart
2.6k
0
votes
1
reply
266
views
Answer:
Answer: how to deal with "The number of covariates exceeds the number of samples" on mat
7 weeks ago by
LChart
2.6k
1
vote
0
replies
290
views
Answer:
Answer: Diference between Co-expressed gene-set enrichment analysis (COGENA) and gene-se
7 weeks ago by
LChart
2.6k
3
votes
0
replies
385
views
Answer:
Answer: Length bias is resequenced DNA GO analysis
7 weeks ago by
LChart
2.6k
2
votes
1
reply
279
views
Answer:
Answer: remove rRNA reads before DE analysis?
7 weeks ago by
LChart
2.6k
0
votes
1
reply
354
views
Comment:
Comment: PTM-aware protein folding / docking
8 weeks ago by
LChart
2.6k
3
votes
3
replies
354
views
PTM-aware protein folding / docking
docking
protein-structure
folding
updated 8 weeks ago by
Mensur Dlakic
★ 23k • written 8 weeks ago by
LChart
2.6k
2
votes
1
reply
292
views
Comment:
Comment: Analysing the Effect of a Drug on the Morphological Changes of a Cell Type
8 weeks ago by
LChart
2.6k
3
votes
0
replies
221
views
Comment:
Comment: Why not use ONLY promoter-bound peaks when testing for enrichment in differentia
8 weeks ago by
LChart
2.6k
0
votes
0
replies
215
views
Comment:
Comment: Time change in expression vs time change in phenotype
8 weeks ago by
LChart
2.6k
2
votes
1
reply
500
views
Answer:
Answer: Is it possible to do DGE analysis using log 2 normalized data with EdgeR ?
9 weeks ago by
LChart
2.6k
2
votes
0
replies
318
views
Answer:
Answer: Using STAR for RNA seq-alignment.
9 weeks ago by
LChart
2.6k
2
votes
0
replies
453
views
Answer:
Answer: Active enhancers for mm39
9 weeks ago by
LChart
2.6k
0
votes
0
replies
392
views
Comment:
Comment: Genetic Carrier Screening Test
10 weeks ago by
LChart
2.6k
1
vote
0
replies
238
views
Answer:
Answer: Are there any papers that have both anatomical imaging data and variants?
10 weeks ago by
LChart
2.6k
1
vote
1
reply
392
views
Answer:
Answer: Genetic Carrier Screening Test
10 weeks ago by
LChart
2.6k
0
votes
0
replies
542
views
Comment:
Comment: ANOVA results viz from ssGSEA
10 weeks ago by
LChart
2.6k
1
vote
1
reply
441
views
Answer:
Answer: Big BCV (Biological Coefficient of Variation) - no sense to continue the analysi
10 weeks ago by
LChart
2.6k
1
vote
0
replies
249
views
Answer:
Answer: Controlling for FDR in 450k methylation microarray data
10 weeks ago by
LChart
2.6k
1
vote
0
replies
252
views
Answer:
Answer: Choosing the correct shrinkage type
10 weeks ago by
LChart
2.6k
1
vote
0
replies
348
views
Comment:
Comment: How to combine different "groups" in DESeq2 constrast
10 weeks ago by
LChart
2.6k
2
votes
1
reply
348
views
Answer:
Answer: How to combine different "groups" in DESeq2 constrast
10 weeks ago by
LChart
2.6k
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