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217
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Answer: Answer: Correcting for continuous covariates before WGCNA
6 days ago by LChart 2.6k
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189
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Comment: Comment: merging structural variants from various callers into one vcf file (long read se
6 days ago by LChart 2.6k
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220
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Answer: Answer: WGCNA module-trait correlation heatmap has horizontal streaks -- how to interpre
6 days ago by LChart 2.6k
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860
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Comment: Comment: Accuracy of Methods for Gene Variant Detection and Quantification: Kallisto Pseu
13 days ago by LChart 2.6k
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287
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Answer: Answer: How to make a volcano plot including all features in a Seurat Object?
18 days ago by LChart 2.6k
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386
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Comment: Comment: UMI in seqc2 dataset Burning Rock data
21 days ago by LChart 2.6k
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274
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Comment: Comment: What burden testing software scales to large cohorts?
22 days ago by LChart 2.6k
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2
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274
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What burden testing software scales to large cohorts?
burden test rare variants SKAT
22 days ago by LChart 2.6k
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585
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Answer: Answer: t-test to check if the cancer samples are significantly different than the norma
23 days ago by LChart 2.6k
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386
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Comment: Comment: UMI in seqc2 dataset Burning Rock data
23 days ago by LChart 2.6k
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490
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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
23 days ago by LChart 2.6k
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376
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Comment: Comment: BCL2 fusions not detected in RNA level
24 days ago by LChart 2.6k
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249
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Answer: Answer: Question: Why residuals can be used as new input in bioinformatic analysis?
24 days ago by LChart 2.6k
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2
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490
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Answer: Answer: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
25 days ago by LChart 2.6k
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0
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420
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Comment: Comment: Transformation of Log2FC to average logFC
26 days ago by LChart 2.6k
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2
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420
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Answer: Answer: Transformation of Log2FC to average logFC
26 days ago by LChart 2.6k
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389
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Answer: Answer: ANOVA or linear regression
27 days ago by LChart 2.6k
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0
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259
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Answer: Answer: BD Rhapsody software - single cell seq
27 days ago by LChart 2.6k
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1.4k
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Comment: Comment: activity of unloaded/unassembled Tn5
28 days ago by LChart 2.6k
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1
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593
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Comment: Comment: Variant calling using samtools
4 weeks ago by LChart 2.6k
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365
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Answer: Answer: Wald's test in DESeq2
4 weeks ago by LChart 2.6k
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1
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1.5k
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Comment: Comment: Extract Reads From A Bam file according to gene components `5'UTR, 1st exon, 1st
5 weeks ago by LChart 2.6k
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0
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332
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Comment: Comment: SKAT vs SIMES methods
5 weeks ago by LChart 2.6k
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332
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Answer: Answer: SKAT vs SIMES methods
5 weeks ago by LChart 2.6k
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1
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333
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Comment: Comment: kinship coefficient negative in multi-sample VCF from exome sequencing
6 weeks ago by LChart 2.6k
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449
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Comment: Comment: SCVI problem
6 weeks ago by LChart 2.6k
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449
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Comment: Comment: SCVI problem
6 weeks ago by LChart 2.6k
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442
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Answer: Answer: How to "guess" the transformation based on already-transformed, "normalized coun
7 weeks ago by LChart 2.6k
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266
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Comment: Comment: how to deal with "The number of covariates exceeds the number of samples" on mat
7 weeks ago by LChart 2.6k
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1
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266
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Answer: Answer: how to deal with "The number of covariates exceeds the number of samples" on mat
7 weeks ago by LChart 2.6k
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0
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290
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Answer: Answer: Diference between Co-expressed gene-set enrichment analysis (COGENA) and gene-se
7 weeks ago by LChart 2.6k
3
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0
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385
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Answer: Answer: Length bias is resequenced DNA GO analysis
7 weeks ago by LChart 2.6k
2
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1
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279
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Answer: Answer: remove rRNA reads before DE analysis?
7 weeks ago by LChart 2.6k
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1
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354
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Comment: Comment: PTM-aware protein folding / docking
8 weeks ago by LChart 2.6k
3
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3
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354
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PTM-aware protein folding / docking
docking protein-structure folding
updated 8 weeks ago by ★ 23k • written 8 weeks ago by 2.6k
2
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1
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292
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Comment: Comment: Analysing the Effect of a Drug on the Morphological Changes of a Cell Type
8 weeks ago by LChart 2.6k
3
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0
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221
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Comment: Comment: Why not use ONLY promoter-bound peaks when testing for enrichment in differentia
8 weeks ago by LChart 2.6k
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0
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215
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Comment: Comment: Time change in expression vs time change in phenotype
8 weeks ago by LChart 2.6k
2
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1
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500
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Answer: Answer: Is it possible to do DGE analysis using log 2 normalized data with EdgeR ?
9 weeks ago by LChart 2.6k
2
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0
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318
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Answer: Answer: Using STAR for RNA seq-alignment.
9 weeks ago by LChart 2.6k
2
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0
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453
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Answer: Answer: Active enhancers for mm39
9 weeks ago by LChart 2.6k
0
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0
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392
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Comment: Comment: Genetic Carrier Screening Test
10 weeks ago by LChart 2.6k
1
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0
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238
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Answer: Answer: Are there any papers that have both anatomical imaging data and variants?
10 weeks ago by LChart 2.6k
1
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1
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392
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Answer: Answer: Genetic Carrier Screening Test
10 weeks ago by LChart 2.6k
0
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0
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542
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Comment: Comment: ANOVA results viz from ssGSEA
10 weeks ago by LChart 2.6k
1
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1
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441
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Answer: Answer: Big BCV (Biological Coefficient of Variation) - no sense to continue the analysi
10 weeks ago by LChart 2.6k
1
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0
replies
249
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Answer: Answer: Controlling for FDR in 450k methylation microarray data
10 weeks ago by LChart 2.6k
1
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0
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252
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Answer: Answer: Choosing the correct shrinkage type
10 weeks ago by LChart 2.6k
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0
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348
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Comment: Comment: How to combine different "groups" in DESeq2 constrast
10 weeks ago by LChart 2.6k
2
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1
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348
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Answer: Answer: How to combine different "groups" in DESeq2 constrast
10 weeks ago by LChart 2.6k
314 results • Page 1 of 7
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