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Comment:
Comment: lollipop plot showing DNA sequence
1 day ago by
LChart
5.1k
0
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0
replies
157
views
Optimal way of running sysvi / scanvi
single-cell
scanvi
integration
3 days ago by
LChart
5.1k
0
votes
0
replies
504
views
Answer:
Answer: Some doubts about GWAS data and MR
7 days ago by
LChart
5.1k
0
votes
0
replies
543
views
Comment:
Comment: Redundant Genes in scRNA-seq Subclusters
7 days ago by
LChart
5.1k
1
vote
1
reply
543
views
Answer:
Answer: Redundant Genes in scRNA-seq Subclusters
8 days ago by
LChart
5.1k
1
vote
1
reply
635
views
Answer:
Answer: missing values for batch in RNA-seq data
10 days ago by
LChart
5.1k
1
vote
1
reply
775
views
Answer:
Answer: Limma t and F-tests: should the degrees of freedom correspond to all samples if
10 days ago by
LChart
5.1k
1
vote
0
replies
606
views
Answer:
Answer: Diffbind or DESEQ2 Chipseq data
11 days ago by
LChart
5.1k
1
vote
0
replies
356
views
Answer:
Answer: Unique insertion sites Calculation from Himar1 C9 based TnSeq
14 days ago by
LChart
5.1k
0
votes
0
replies
537
views
Comment:
Comment: BWA-MEM with an array of files
15 days ago by
LChart
5.1k
0
votes
1
reply
614
views
Answer:
Answer: Interpreting genomic features distribution for CUT&RUN peaks
21 days ago by
LChart
5.1k
0
votes
1
reply
6.3k
views
Comment:
Comment: Splice junctions plots for long-read seq data
6 weeks ago by
LChart
5.1k
1
vote
0
replies
11k
views
Answer:
Answer: Tools for raw reads that estimate the percentage of reads that hit marker genes
7 weeks ago by
LChart
5.1k
2
votes
0
replies
3.9k
views
Answer:
Answer: Regress out covariate in boxplot
8 weeks ago by
LChart
5.1k
0
votes
0
replies
3.8k
views
Answer:
Answer: DESeq2 design: longitudinal two timepoint study with treatment effect
8 weeks ago by
LChart
5.1k
0
votes
0
replies
11k
views
Answer:
Answer: FDR correction can sometimes lie to you!
10 weeks ago by
LChart
5.1k
0
votes
1
reply
4.3k
views
Answer:
Answer: Weird p-value distribution on edgeR results
4 months ago by
LChart
5.1k
3
votes
1
reply
774
views
Answer:
Answer: DESeq2 LRT test with multifactorial design
4 months ago by
LChart
5.1k
0
votes
0
replies
486
views
Comment:
Comment: Is it valid to stack brightfield and fluorescence channels in a CNN input?
4 months ago by
LChart
5.1k
1
vote
1
reply
1.8k
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Answer:
Answer: Discussions about QC of sc-multiomic-ATAC_RNA-seq from 10xgenomics platform in t
4 months ago by
LChart
5.1k
0
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0
replies
812
views
Comment:
Comment: WGCNA pickSoftThreshold problem
4 months ago by
LChart
5.1k
3
votes
1
reply
662
views
Answer:
Answer: WGCNA blockwiseModules function for small datasets
4 months ago by
LChart
5.1k
1
vote
1
reply
812
views
Answer:
Answer: WGCNA pickSoftThreshold problem
4 months ago by
LChart
5.1k
4
votes
0
replies
880
views
Answer:
Answer: Which GWAS tool to use that can work on Czech cases and British controls, on a b
5 months ago by
LChart
5.1k
1
vote
0
replies
647
views
Answer:
Answer: More rare variants than common variants
5 months ago by
LChart
5.1k
1
vote
0
replies
1.1k
views
Comment:
Comment: Pooling Replicates in Omics Analysis: Trade-off Between Cost and Data Robustness
5 months ago by
LChart
5.1k
0
votes
0
replies
746
views
Answer:
Answer: Alternatives to WGCNA
5 months ago by
LChart
5.1k
0
votes
0
replies
611
views
Answer:
Answer: I have doubts regarding conducting meta-analysis of differentially expressed gen
6 months ago by
LChart
5.1k
0
votes
1
reply
947
views
Comment:
Comment: Methylation cpg probes annotation
7 months ago by
LChart
5.1k
1
vote
1
reply
668
views
Answer:
Answer: How to make amazing UMAP to spatialPlot GIF
7 months ago by
LChart
5.1k
0
votes
0
replies
701
views
Answer:
Answer: How to compute DS (diploid dosage) from HDS (haploid dosage) in VCF?
7 months ago by
LChart
5.1k
0
votes
2
replies
1.0k
views
Comment:
Comment: PIASO, a python toolkit for single-cell data analysis
8 months ago by
LChart
5.1k
0
votes
0
replies
1.1k
views
Comment:
Comment: P-value calculation between groups in split violin plot
8 months ago by
LChart
5.1k
0
votes
1
reply
1.0k
views
Comment:
Comment: PIASO, a python toolkit for single-cell data analysis
8 months ago by
LChart
5.1k
0
votes
0
replies
1.9k
views
Comment:
Comment: cellxgene DNA Methylation data
8 months ago by
LChart
5.1k
1
vote
1
reply
4.3k
views
Answer:
Answer: How to use harmony with scanpy?
8 months ago by
LChart
5.1k
1
vote
1
reply
970
views
Answer:
Answer: Dimensionality reduction using RNA and protein expression
8 months ago by
LChart
5.1k
2
votes
0
replies
1.3k
views
Answer:
Answer: Why don't mRNA levels measure protein synthesis rates?
9 months ago by
LChart
5.1k
2
votes
0
replies
615
views
Answer:
Answer: Integration of Cut&Tag to ATACseq and RNAseq data - impact of a mutation
9 months ago by
LChart
5.1k
3
votes
1
reply
958
views
Answer:
Answer: Flattened TSS enrichment x unique fragments from scATAC experiment
9 months ago by
LChart
5.1k
0
votes
0
replies
760
views
Comment:
Comment: Is there a way or a tool to compare two hmm DNA profiles?
9 months ago by
LChart
5.1k
1
vote
0
replies
2.0k
views
Comment:
Comment: Best Practices for ATACseq for Performing Differential Accessibility Analysis
9 months ago by
LChart
5.1k
2
votes
0
replies
1.9k
views
Comment:
Comment: cellxgene DNA Methylation data
10 months ago by
LChart
5.1k
1
vote
1
reply
1.9k
views
Comment:
Comment: cellxgene DNA Methylation data
10 months ago by
LChart
5.1k
0
votes
1
reply
1.6k
views
Comment:
Comment: chip seq data visualization
10 months ago by
LChart
5.1k
3
votes
1
reply
1.9k
views
Answer:
Answer: cellxgene DNA Methylation data
10 months ago by
LChart
5.1k
0
votes
1
reply
1.7k
views
Answer:
Answer: Create the correct contrast in limma when want to combine 2 or more groups
10 months ago by
LChart
5.1k
0
votes
1
reply
1.6k
views
Comment:
Comment: chip seq data visualization
10 months ago by
LChart
5.1k
0
votes
1
reply
1.1k
views
Answer:
Answer: Unexpected results: Conservation of cCREs
10 months ago by
LChart
5.1k
1
vote
1
reply
1.7k
views
Answer:
Answer: high IgG background
10 months ago by
LChart
5.1k
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