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Comment:
Comment: Are mapped RefSeq, Ensembl, and UniProt IDs pointing to the same protein sequenc
3.1 years ago by
LChart
5.1k
1
vote
1
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Answer:
Answer: Are mapped RefSeq, Ensembl, and UniProt IDs pointing to the same protein sequenc
3.1 years ago by
LChart
5.1k
0
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1
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2.5k
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Comment:
Comment: Normalize Bimodal Distribution
3.1 years ago by
LChart
5.1k
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2.5k
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Comment:
Comment: Normalize Bimodal Distribution
3.1 years ago by
LChart
5.1k
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2.8k
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Comment:
Comment: lasso-penalised model and glm to identify best predictors genes.
3.1 years ago by
LChart
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1.3k
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Comment:
Comment: Correlogram under barplot
3.1 years ago by
LChart
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Comment:
Comment: Correlogram under barplot
3.1 years ago by
LChart
5.1k
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4
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1.3k
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Correlogram under barplot
ggplot2
R
visualization
3.1 years ago by
LChart
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1
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2.8k
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Answer:
Answer: lasso-penalised model and glm to identify best predictors genes.
3.1 years ago by
LChart
5.1k
2
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0
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793
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Answer:
Answer: How to merge 3 tsv files in R? with the same columns names ?
3.1 years ago by
LChart
5.1k
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673
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Answer:
Answer: Validate RNAseq reads against array genotypes?
3.1 years ago by
LChart
5.1k
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0
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1.4k
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Comment:
Comment: Influence of ribosomal depletion efficiency on PCA clustering
3.1 years ago by
LChart
5.1k
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1
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2.0k
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Answer:
Answer: Why different read depth on IGV and in VCF for a variant
3.1 years ago by
LChart
5.1k
2
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967
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Answer:
Answer: fgsea
3.1 years ago by
LChart
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1.4k
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Comment:
Comment: Influence of ribosomal depletion efficiency on PCA clustering
3.1 years ago by
LChart
5.1k
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1.1k
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Answer:
Answer: Correlation between two different datasets: between results of RNAseq and absenc
3.1 years ago by
LChart
5.1k
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0
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3.8k
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Comment:
Comment: High proportion of non-biallelic SNPs in dbSNP 155 vs 144
3.1 years ago by
LChart
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3.8k
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Comment:
Comment: Why isn't GWAS used in oncology?
3.1 years ago by
LChart
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3.8k
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Comment:
Comment: Why isn't GWAS used in oncology?
3.1 years ago by
LChart
5.1k
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Answer:
Answer: Why isn't GWAS used in oncology?
3.1 years ago by
LChart
5.1k
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1
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3.8k
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Answer:
Answer: High proportion of non-biallelic SNPs in dbSNP 155 vs 144
3.1 years ago by
LChart
5.1k
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0
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1.7k
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Answer:
Answer: EdgeR: upregulated with respect to what group?
3.1 years ago by
LChart
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1
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1.2k
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Answer:
Answer: Evaluate normalization method for scRNA-Seq Dataset
3.1 years ago by
LChart
5.1k
2
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1
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1.4k
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Answer:
Answer: Influence of ribosomal depletion efficiency on PCA clustering
3.1 years ago by
LChart
5.1k
3
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1
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927
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Answer:
Answer: checking whether SNP is covered by certain microArray?
3.1 years ago by
LChart
5.1k
3
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1
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949
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Answer:
Answer: Filtering multiple-samples VCF by genotype with GATK
3.1 years ago by
LChart
5.1k
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0
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Answer:
Answer: RNAseq matrix input for WGCNA analysis
3.1 years ago by
LChart
5.1k
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1
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Comment:
Comment: Are upset plots bad for differential expression analysis?
3.1 years ago by
LChart
5.1k
0
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1
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1.9k
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Comment:
Comment: Using Harmony on scATAC Count Files
3.1 years ago by
LChart
5.1k
2
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715
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Answer:
Answer: extracting sequences from a bam file
3.1 years ago by
LChart
5.1k
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0
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1.9k
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Comment:
Comment: Using Harmony on scATAC Count Files
3.1 years ago by
LChart
5.1k
4
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1
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2.9k
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Answer:
Answer: Are upset plots bad for differential expression analysis?
3.1 years ago by
LChart
5.1k
0
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1
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1.1k
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Answer:
Answer: Genome-wide enrichment of histone marks and correlation with gene expression: Ap
3.1 years ago by
LChart
5.1k
1
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1
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1.9k
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Answer:
Answer: Using Harmony on scATAC Count Files
3.1 years ago by
LChart
5.1k
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0
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1.2k
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Comment:
Comment: LInear Models with HLA-B alleles in R
3.1 years ago by
LChart
5.1k
2
votes
0
replies
1.5k
views
Comment:
Comment: How to filter out the promoter-TSS peaks from the `.narrowPeak` file?
3.1 years ago by
LChart
5.1k
2
votes
1
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1.2k
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Answer:
Answer: LInear Models with HLA-B alleles in R
3.1 years ago by
LChart
5.1k
3
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1
reply
1.5k
views
Answer:
Answer: How to filter out the promoter-TSS peaks from the `.narrowPeak` file?
3.1 years ago by
LChart
5.1k
0
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1
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2.4k
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Answer:
Answer: How to obtain fasta sequences at only mapped sites
3.1 years ago by
LChart
5.1k
0
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0
replies
1.6k
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Comment:
Comment: deseq2 normalization for Gtex datasets
3.1 years ago by
LChart
5.1k
1
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1
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1.6k
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Answer:
Answer: deseq2 normalization for Gtex datasets
3.1 years ago by
LChart
5.1k
2
votes
0
replies
717
views
Answer:
Answer: Comparing vcf's in different formats
3.1 years ago by
LChart
5.1k
0
votes
0
replies
3.8k
views
Comment:
Comment: Negative values after batch correction using removeBatchEffect from Limma
3.1 years ago by
LChart
5.1k
2
votes
2
replies
3.8k
views
Answer:
Answer: Negative values after batch correction using removeBatchEffect from Limma
3.1 years ago by
LChart
5.1k
0
votes
2
replies
5.5k
views
Comment:
Comment: How to filter SNPs with excess heterozygosity from a large vcf
3.1 years ago by
LChart
5.1k
0
votes
1
reply
5.5k
views
Answer:
Answer: How to filter SNPs with excess heterozygosity from a large vcf
3.1 years ago by
LChart
5.1k
0
votes
0
replies
3.5k
views
Answer:
Answer: Some cells in meta.data not present in provided counts matrix.
3.1 years ago by
LChart
5.1k
1
vote
1
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1.3k
views
Answer:
Answer: Get gene names from rs SNP ids for mmusculus_gene_ensembl
3.1 years ago by
LChart
5.1k
0
votes
0
replies
844
views
Answer:
Answer: Is it possible to annotate each person individually with VEP?
3.1 years ago by
LChart
5.1k
4
votes
1
reply
1.6k
views
Answer:
Answer: Differential peak analysis for ATAC-seq using transformed and normalized CPM ma
3.1 years ago by
LChart
5.1k
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