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Answer: Answer: Help searching homologs in a genome
2.3 years ago by LChart 5.2k
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1.7k
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Answer: Answer: Analysis of a batch-normalized expression dataset
2.4 years ago by LChart 5.2k
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1.7k
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Comment: Comment: Obtain genomic coordinates of all occurrences of a small sequence (i.e: TCTTCTC)
2.4 years ago by LChart 5.2k
3
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2.2k
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Answer: Answer: SNP analysis with an assembly
2.4 years ago by LChart 5.2k
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1.3k
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Answer: Answer: Other independent methods or ways to confirm potential candidate genes observed
2.4 years ago by LChart 5.2k
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3.0k
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Comment: Comment: How do I run DE for TPM values (not CPM)?
2.4 years ago by LChart 5.2k
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3.0k
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Comment: Comment: How do I run DE for TPM values (not CPM)?
2.4 years ago by LChart 5.2k
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1
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9.1k
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Comment: Comment: Is there a file format better suited for the era of pangenomics than the .vcf? W
2.4 years ago by LChart 5.2k
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3.0k
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Answer: Answer: How do I run DE for TPM values (not CPM)?
2.4 years ago by LChart 5.2k
0
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1
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9.1k
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Comment: Comment: Is there a file format better suited for the era of pangenomics than the .vcf? W
2.4 years ago by LChart 5.2k
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2
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2.4k
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Answer: Answer: Why some insertions are symbolic in ALT column?
2.4 years ago by LChart 5.2k
7
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9.1k
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Answer: Answer: The .vcf format: is there a file format better suited for the era of pangenomics
2.4 years ago by LChart 5.2k
0
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1
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5.1k
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Comment: Comment: Limma returned only positive logFC values
2.4 years ago by LChart 5.2k
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1
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5.1k
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Comment: Comment: Limma returned only positive logFC values
2.4 years ago by LChart 5.2k
0
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1
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2.3k
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Comment: Comment: calculate p value and associated z score for snp-gene pair
2.4 years ago by LChart 5.2k
2
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1
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2.3k
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Comment: Comment: calculate p value and associated z score for snp-gene pair
2.4 years ago by LChart 5.2k
0
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0
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946
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Comment: Comment: WGCNA Trait File Issues
2.4 years ago by LChart 5.2k
2
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1
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2.3k
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Answer: Answer: calculate p value and associated z score for snp-gene pair
2.4 years ago by LChart 5.2k
1
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0
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1.7k
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Answer: Answer: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
2.4 years ago by LChart 5.2k
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1.0k
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Comment: Comment: Random dataset and DESeq2
2.4 years ago by LChart 5.2k
1
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0
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956
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Answer: Answer: Network cross-validation
2.4 years ago by LChart 5.2k
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1.3k
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Answer: Answer: Correcting for continuous covariates before WGCNA
2.5 years ago by LChart 5.2k
0
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0
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890
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Comment: Comment: merging structural variants from various callers into one vcf file (long read se
2.5 years ago by LChart 5.2k
1
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1.1k
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Answer: Answer: WGCNA module-trait correlation heatmap has horizontal streaks -- how to interpre
2.5 years ago by LChart 5.2k
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1
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2.5k
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Comment: Comment: Accuracy of Methods for Gene Variant Detection and Quantification: Kallisto Pseu
2.5 years ago by LChart 5.2k
1
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4.4k
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Answer: Answer: How to make a volcano plot including all features in a Seurat Object?
2.5 years ago by LChart 5.2k
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1.3k
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Comment: Comment: UMI in seqc2 dataset Burning Rock data
2.5 years ago by LChart 5.2k
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1.3k
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Comment: Comment: What burden testing software scales to large cohorts?
2.5 years ago by LChart 5.2k
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2
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1.3k
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What burden testing software scales to large cohorts?
burden test rare variants SKAT
2.5 years ago by LChart 5.2k
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1
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1.8k
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Answer: Answer: t-test to check if the cancer samples are significantly different than the norma
2.5 years ago by LChart 5.2k
0
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1
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1.3k
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Comment: Comment: UMI in seqc2 dataset Burning Rock data
2.5 years ago by LChart 5.2k
1
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0
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2.4k
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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
2.5 years ago by LChart 5.2k
0
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0
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1.3k
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Comment: Comment: BCL2 fusions not detected in RNA level
2.5 years ago by LChart 5.2k
2
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0
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948
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Answer: Answer: Question: Why residuals can be used as new input in bioinformatic analysis?
2.5 years ago by LChart 5.2k
2
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2
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2.4k
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Answer: Answer: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
2.5 years ago by LChart 5.2k
2
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0
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3.7k
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Comment: Comment: Transformation of Log2FC to average logFC
2.5 years ago by LChart 5.2k
1
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2
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3.7k
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Answer: Answer: Transformation of Log2FC to average logFC
2.5 years ago by LChart 5.2k
1
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1
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1.8k
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Answer: Answer: ANOVA or linear regression
2.5 years ago by LChart 5.2k
2
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0
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4.7k
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Answer: Answer: BD Rhapsody software - single cell seq
2.5 years ago by LChart 5.2k
0
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1
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5.2k
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Comment: Comment: activity of unloaded/unassembled Tn5
2.5 years ago by LChart 5.2k
1
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1
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3.1k
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Comment: Comment: Variant calling using samtools
2.5 years ago by LChart 5.2k
8
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1
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2.5k
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Answer: Answer: Wald's test in DESeq2
2.5 years ago by LChart 5.2k
1
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1
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3.9k
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Comment: Comment: Extract Reads From A Bam file according to gene components `5'UTR, 1st exon, 1st
2.6 years ago by LChart 5.2k
1
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0
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1.3k
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Comment: Comment: SKAT vs SIMES methods
2.6 years ago by LChart 5.2k
1
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1
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1.3k
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Answer: Answer: SKAT vs SIMES methods
2.6 years ago by LChart 5.2k
1
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1
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1.6k
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Comment: Comment: kinship coefficient negative in multi-sample VCF from exome sequencing
2.6 years ago by LChart 5.2k
0
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1
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3.4k
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Comment: Comment: SCVI problem
2.6 years ago by LChart 5.2k
0
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1
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3.4k
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Comment: Comment: SCVI problem
2.6 years ago by LChart 5.2k
1
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1
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1.7k
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Answer: Answer: How to "guess" the transformation based on already-transformed, "normalized coun
2.6 years ago by LChart 5.2k
1
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1
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1.1k
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Comment: Comment: how to deal with "The number of covariates exceeds the number of samples" on mat
2.6 years ago by LChart 5.2k
635 results • Page 7 of 13
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