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180
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Comment:
Comment: Fewer sites in vcf than in reference genome despite Emit_All_Sites argument
15 hours ago by
LChart
3.9k
0
votes
0
replies
132
views
Answer:
Answer: Allele count of 2 for homoplasmic MT variants in VCF
16 hours ago by
LChart
3.9k
0
votes
0
replies
164
views
Answer:
Answer: Seeking Guidance on Identifying Mutations in DARs from ATAC Data in Cancer Genom
15 days ago by
LChart
3.9k
1
vote
1
reply
297
views
Answer:
Answer: Where to get the following bed file?
15 days ago by
LChart
3.9k
0
votes
0
replies
676
views
Comment:
Comment: Post-imputation plot
19 days ago by
LChart
3.9k
0
votes
1
reply
676
views
Answer:
Answer: Post-imputation plot
20 days ago by
LChart
3.9k
0
votes
1
reply
676
views
Comment:
Comment: Post-imputation plot
21 days ago by
LChart
3.9k
0
votes
1
reply
676
views
Answer:
Answer: Post-imputation plot
22 days ago by
LChart
3.9k
0
votes
1
reply
596
views
Comment:
Comment: How to reduce the variation of CIBERSORTx results?
4 weeks ago by
LChart
3.9k
0
votes
1
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596
views
Comment:
Comment: How to reduce the variation of CIBERSORTx results?
4 weeks ago by
LChart
3.9k
0
votes
0
replies
327
views
Answer:
Answer: Inconsistency in SNP detection pipelines for multi-sample analysis
4 weeks ago by
LChart
3.9k
2
votes
1
reply
752
views
Answer:
Answer: DEG analysis of RNA-seq data across multiple tissues and two conditions
4 weeks ago by
LChart
3.9k
0
votes
1
reply
288
views
Answer:
Answer: Getting marker genes for cell types
5 weeks ago by
LChart
3.9k
0
votes
0
replies
279
views
Answer:
Answer: Using adonis to include a random effect
5 weeks ago by
LChart
3.9k
0
votes
0
replies
542
views
Answer:
Answer: how to get the variance explained by the independent variable from multivariate
5 weeks ago by
LChart
3.9k
1
vote
1
reply
542
views
Answer:
Answer: how to get the variance explained by the independent variable from multivariate
5 weeks ago by
LChart
3.9k
0
votes
1
reply
377
views
Answer:
Answer: Why is DESeq2 normalization making my top feature have identical values across s
5 weeks ago by
LChart
3.9k
0
votes
1
reply
527
views
Comment:
Comment: Selection criteria for nanobody
6 weeks ago by
LChart
3.9k
1
vote
1
reply
647
views
Comment:
Comment: Very low RNA splicing rate for pulmonary AT2 cells
7 weeks ago by
LChart
3.9k
0
votes
0
replies
202
views
Comment:
Comment: WGCNA is not generationg TOMfiles
7 weeks ago by
LChart
3.9k
0
votes
1
reply
527
views
Comment:
Comment: Selection criteria for nanobody
7 weeks ago by
LChart
3.9k
0
votes
0
replies
405
views
Comment:
Comment: cell type adjustment - how many cell types to include?
7 weeks ago by
LChart
3.9k
1
vote
1
reply
346
views
Answer:
Answer: I am unsure why my files are not being accepted in bedtools jaccard, any tips?
7 weeks ago by
LChart
3.9k
0
votes
1
reply
527
views
Answer:
Answer: Selection criteria for nanobody
7 weeks ago by
LChart
3.9k
0
votes
1
reply
405
views
Answer:
Answer: cell type adjustment - how many cell types to include?
7 weeks ago by
LChart
3.9k
0
votes
1
reply
360
views
Comment:
Comment: Coverage observed in introns in the Knockdown genes but not in knockout genes
7 weeks ago by
LChart
3.9k
0
votes
1
reply
360
views
Comment:
Comment: Coverage observed in introns in the Kockdown genes but not in knockout genes
8 weeks ago by
LChart
3.9k
0
votes
0
replies
320
views
Comment:
Comment: two channel detection in SNP-chip
8 weeks ago by
LChart
3.9k
0
votes
1
reply
320
views
Answer:
Answer: two channel detection in SNP-chip
8 weeks ago by
LChart
3.9k
1
vote
1
reply
290
views
Comment:
Comment: Reference mouse phased vcf
8 weeks ago by
LChart
3.9k
0
votes
1
reply
383
views
Answer:
Answer: Beagle Phasing and Imputation
9 weeks ago by
LChart
3.9k
3
votes
0
replies
220
views
Answer:
Answer: basal gene expression level
9 weeks ago by
LChart
3.9k
0
votes
1
reply
637
views
Comment:
Comment: How to corrected test statistics based on the LDSC intercept?
9 weeks ago by
LChart
3.9k
0
votes
1
reply
637
views
Answer:
Answer: How to corrected test statistics based on the LDSC intercept?
9 weeks ago by
LChart
3.9k
0
votes
1
reply
637
views
Comment:
Comment: How to corrected test statistics based on the LDSC intercept?
9 weeks ago by
LChart
3.9k
1
vote
1
reply
403
views
Comment:
Comment: 'incomplete' intersect among two files
9 weeks ago by
LChart
3.9k
0
votes
0
replies
276
views
Answer:
Answer: Fold change vs signal p-value in ENCODE ATAC-seq
9 weeks ago by
LChart
3.9k
0
votes
0
replies
515
views
Answer:
Answer: VCF file not being indexed, decided to sort could not sort
9 weeks ago by
LChart
3.9k
0
votes
1
reply
515
views
Comment:
Comment: VCF file not being indexed, decided to sort could not sort
9 weeks ago by
LChart
3.9k
0
votes
1
reply
457
views
Comment:
Comment: Single cell demultiplexing using 10x and TotalSeq-B
9 weeks ago by
LChart
3.9k
0
votes
2
replies
521
views
Answer:
Answer: java version compatible with GATK 3.2.2
10 weeks ago by
LChart
3.9k
0
votes
1
reply
946
views
Comment:
Comment: Help with the new nomenclature of multi-nucleotide variants
10 weeks ago by
LChart
3.9k
0
votes
1
reply
946
views
Comment:
Comment: Help with the new nomenclature of multi-nucleotide variants
10 weeks ago by
LChart
3.9k
0
votes
1
reply
530
views
Comment:
Comment: What are the best HW p-value & MAF cutoffs based on my study ?
10 weeks ago by
LChart
3.9k
0
votes
1
reply
946
views
Comment:
Comment: Help with the new nomenclature of multi-nucleotide variants
10 weeks ago by
LChart
3.9k
0
votes
1
reply
946
views
Comment:
Comment: Help with the new nomenclature of multi-nucleotide variants
10 weeks ago by
LChart
3.9k
2
votes
1
reply
343
views
Answer:
Answer: Calculation variant frequencies for copy number events for a cohort
10 weeks ago by
LChart
3.9k
1
vote
0
replies
256
views
Answer:
Answer: convert and merge somatic vcf file to plink format
10 weeks ago by
LChart
3.9k
0
votes
1
reply
530
views
Answer:
Answer: What are the best HW p-value & MAF cutoffs based on my study ?
10 weeks ago by
LChart
3.9k
0
votes
1
reply
421
views
Comment:
Comment: single nuclei sequencing questions
10 weeks ago by
LChart
3.9k
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