Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
all
3
votes
0
replies
876
views
Comment:
Comment: Getting libType without running quantification with Salmon
23 months ago by
Rob
5.9k
4
votes
1
reply
1.5k
views
Answer:
Answer: Inconsistency between alignment rates of BWA-mem and bowtie2
23 months ago by
Rob
5.9k
0
votes
1
reply
1.2k
views
Comment:
C: Mapping rate troubles
2.1 years ago by
Rob
5.9k
0
votes
1
reply
1.7k
views
Comment:
C: Salmon BAM target length different to FASTA file sequence length
2.1 years ago by
Rob
5.9k
1
vote
1
reply
1.7k
views
Comment:
C: Salmon BAM target length different to FASTA file sequence length
2.1 years ago by
Rob
5.9k
1
vote
2
replies
1.7k
views
Comment:
C: Salmon BAM target length different to FASTA file sequence length
2.2 years ago by
Rob
5.9k
2
votes
1
reply
5.1k
views
Comment:
C: How to change cellranger multimapping algorithm
2.2 years ago by
Rob
5.9k
1
vote
1
reply
5.1k
views
Comment:
C: How to change cellranger multimapping algorithm
2.2 years ago by
Rob
5.9k
2
votes
0
replies
1.0k
views
Comment:
C: RNA-Seq junction reads overhang imbalance
2.3 years ago by
Rob
5.9k
3
votes
0
replies
1.0k
views
Answer:
C: Quantify Isoforms in RNA-Seq data
2.3 years ago by
Rob
5.9k
10
votes
1
reply
6.1k
views
Answer:
A: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
2.4 years ago by
Rob
5.9k
11
votes
0
replies
6.1k
views
Answer:
A: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
2.4 years ago by
Rob
5.9k
2
votes
0
replies
3.7k
views
Comment:
C: update salmon with conda
2.4 years ago by
Rob
5.9k
2
votes
1
reply
3.7k
views
Answer:
A: update salmon with conda
2.4 years ago by
Rob
5.9k
1
vote
0
replies
6.0k
views
Comment:
C: How does salmon deal with decoy?
2.5 years ago by
Rob
5.9k
11
votes
2
replies
6.0k
views
Comment:
C: How does salmon deal with decoy?
2.5 years ago by
Rob
5.9k
4
votes
1
reply
2.0k
views
Answer:
A: Gibbs sampling/bootstrap replicates in Salmon
2.5 years ago by
Rob
5.9k
0
votes
1
reply
1.0k
views
Comment:
C: Transcripts with no read support
2.5 years ago by
Rob
5.9k
0
votes
2
replies
1.0k
views
Comment:
C: Transcripts with no read support
2.5 years ago by
Rob
5.9k
2
votes
1
reply
2.2k
views
Answer:
A: How can I align single RNA seq(scRNAseq) data by using STAR or another aligner?
2.5 years ago by
Rob
5.9k
2
votes
1
reply
1.2k
views
Answer:
A: rsem-simulate-reads: simulating different data
2.6 years ago by
Rob
5.9k
11
votes
1
reply
6.0k
views
Answer:
A: How does salmon deal with decoy?
2.6 years ago by
Rob
5.9k
3
votes
1
reply
1.1k
views
Answer:
A: How to get different isoform's counts in different cell by using alevin (salmon
2.6 years ago by
Rob
5.9k
0
votes
0
replies
1.1k
views
Comment:
C: Salmon or Kallisto without reference transcriptome - possible?
2.7 years ago by
Rob
5.9k
2
votes
0
replies
724
views
Answer:
A: Trimmomatic and Salmon error
2.7 years ago by
Rob
5.9k
1
vote
1
reply
1.2k
views
Comment:
C: Salmon building index and quantifying mapping questions
2.7 years ago by
Rob
5.9k
0
votes
0
replies
1.2k
views
Comment:
C: Salmon building index and quantifying mapping questions
2.7 years ago by
Rob
5.9k
1
vote
1
reply
2.2k
views
Comment:
C: minimap2: aligning multiple regions to a read in a fastq
2.7 years ago by
Rob
5.9k
3
votes
1
reply
1.4k
views
Answer:
A: Transcript level counts from full length scRNA data
2.8 years ago by
Rob
5.9k
0
votes
1
reply
3.0k
views
Comment:
C: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
2.8 years ago by
Rob
5.9k
1
vote
1
reply
3.0k
views
Answer:
A: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
2.8 years ago by
Rob
5.9k
3
votes
0
replies
2.7k
views
Answer:
A: Question related to time complexity of Needleman-Wunsch Algorithm
2.8 years ago by
Rob
5.9k
0
votes
0
replies
873
views
Comment:
C: Tool for computing all solutions to the small parsimony problem
2.8 years ago by
Rob
5.9k
2
votes
0
replies
1.5k
views
Comment:
C: having trouble running Salmon in anaconda prompt
2.9 years ago by
Rob
5.9k
0
votes
0
replies
1.5k
views
Comment:
C: having trouble running Salmon in anaconda prompt
2.9 years ago by
Rob
5.9k
1
vote
1
reply
1.7k
views
Comment:
C: hisat2 salmon alignment error
3.0 years ago by
Rob
5.9k
1
vote
1
reply
1.7k
views
Answer:
A: hisat2 salmon alignment error
3.0 years ago by
Rob
5.9k
0
votes
0
replies
786
views
Comment:
C: parameters mapping in salmon software
3.0 years ago by
Rob
5.9k
0
votes
0
replies
786
views
Comment:
C: parameters mapping in salmon software
3.0 years ago by
Rob
5.9k
1
vote
2
replies
1.2k
views
Comment:
C: can salmon distinguish similar transcript?
3.0 years ago by
Rob
5.9k
5
votes
3
replies
1.2k
views
Answer:
C: can salmon distinguish similar transcript?
3.0 years ago by
Rob
5.9k
3
votes
1
reply
2.7k
views
Answer:
A: warning when creating salmon index from GENCODE transcriptome
3.1 years ago by
Rob
5.9k
2
votes
1
reply
941
views
Answer:
C: Salmon only processes human reads from PDX data
3.1 years ago by
Rob
5.9k
2
votes
2
replies
4.0k
views
Comment:
C: Sailfish TPM normalization: does it take into account the size the library?
updated 3.2 years ago by
Ram
38k • written 7.1 years ago by
Rob
5.9k
1
vote
1
reply
2.5k
views
Comment:
C: Can k-tuple(k-mer/k-word) methods apply to reads generated from next-generation
updated 3.2 years ago by
Ram
38k • written 8.8 years ago by
Rob
5.9k
2
votes
0
replies
4.7k
views
Comment:
C: confusion in the DeBruijn Graph
updated 3.2 years ago by
Ram
38k • written 7.1 years ago by
Rob
5.9k
1
vote
1
reply
4.7k
views
Comment:
C: confusion in the DeBruijn Graph
updated 3.2 years ago by
Ram
38k • written 7.1 years ago by
Rob
5.9k
6
votes
2
replies
41k
views
Answer:
A: Up-to-date Online RNA Sequence Analysis Training/Courses/Papers?
updated 3.2 years ago by
Ram
38k • written 7.1 years ago by
Rob
5.9k
3
votes
0
replies
6.1k
views
Answer:
A: K-mers using JEllyfish
updated 3.2 years ago by
Ram
38k • written 8.8 years ago by
Rob
5.9k
2
votes
0
replies
4.9k
views
Comment:
C: align shortreads using R
updated 3.2 years ago by
Ram
38k • written 7.1 years ago by
Rob
5.9k
320 results • Page
2 of 7
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6