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Comment:
Comment: Why is chromHMM's binarizeBed with the -peaks argument not recommended for broad
2.2 years ago by
e.r.zakiev
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Comment:
Comment: Extract RPKM values from Diffbind
2.2 years ago by
e.r.zakiev
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Comment:
Comment: barcodes not show up in overrepresented sequences in FASTQC
2.3 years ago by
e.r.zakiev
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Comment:
Comment: barcodes not show up in overrepresented sequences in FASTQC
2.3 years ago by
e.r.zakiev
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Comment:
Comment: Panther db Reference List
2.5 years ago by
e.r.zakiev
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Comment:
Comment: ATAC-seq peak calling with MACS
2.6 years ago by
e.r.zakiev
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Comment:
Comment: ClusterProfiler enrichKEGG – remove organism name in plots?
2.6 years ago by
e.r.zakiev
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2.6k
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Comment:
Comment: msigdbr returns the same genesets for mouse as in for human,
2.7 years ago by
e.r.zakiev
▴ 260
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Comment:
Comment: Sorting a STAR-output bam file with samtools leads to a significant reduction in
2.7 years ago by
e.r.zakiev
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4.1k
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Comment:
Comment: Sorting a STAR-output bam file with samtools leads to a significant reduction in
2.7 years ago by
e.r.zakiev
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2.6k
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Comment:
Comment: msigdbr returns the same genesets for mouse as in for human,
2.7 years ago by
e.r.zakiev
▴ 260
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7.4k
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Comment:
Comment: Ensembl Hg38 dna, dna_rm, and dna_sm
2.7 years ago by
e.r.zakiev
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Comment:
Comment: Cell Type Marker Databases?
2.7 years ago by
e.r.zakiev
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Comment:
Comment: How to submit multithreaded jobs on SLURM and determine number of threads?
2.7 years ago by
e.r.zakiev
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Comment:
Comment: Splice aware vs splice unaware aligners?
2.7 years ago by
e.r.zakiev
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Comment:
Comment: Snakemake vs. Nextflow: strengths and weaknesses
2.7 years ago by
e.r.zakiev
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Comment:
Comment: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
2.7 years ago by
e.r.zakiev
▴ 260
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5.9k
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Comment:
Comment: What does the decimal ending of a transcript id mean?
2.7 years ago by
e.r.zakiev
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Comment:
Comment: RNA-Seq analysis using STAR and Salmon
2.7 years ago by
e.r.zakiev
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2.7k
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Comment:
Comment: Reference genome
2.7 years ago by
e.r.zakiev
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2.5k
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Comment:
Comment: blast engine error empty blast query vector
2.7 years ago by
e.r.zakiev
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7.5k
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Comment:
Comment: Methodological problems are extremely common for enrichment analysis - beware th
3.1 years ago by
e.r.zakiev
▴ 260
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7.5k
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Comment:
Comment: Methodological problems are extremely common for enrichment analysis - beware th
3.1 years ago by
e.r.zakiev
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