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Comment: Comment: How to deal with two dataset of RNA expression
2.1 years ago by biofalconch ★ 1.3k
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1.4k
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Comment: Comment: How to convert SeuratV4 object to SeuratV5 object
2.1 years ago by biofalconch ★ 1.3k
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1.3k
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Comment: Comment: Next generation sequencing
2.1 years ago by biofalconch ★ 1.3k
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4.5k
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Comment: Comment: How to extract protein sequences from a .gff file
2.1 years ago by biofalconch ★ 1.3k
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4.5k
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Answer: Answer: How to extract protein sequences from a .gff file
2.1 years ago by biofalconch ★ 1.3k
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1
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3.0k
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Comment: Comment: Filter gene with low count in RNA-seq
2.1 years ago by biofalconch ★ 1.3k
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3.1k
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Answer: Answer: Minimap2 map-pb index for ONT reads
2.1 years ago by biofalconch ★ 1.3k
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613
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Comment: Comment: piRNA seq
2.1 years ago by biofalconch ★ 1.3k
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1.4k
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Comment: Comment: Calculating coverage/depth for nanopore dRNAseq reads with reference transcripto
2.1 years ago by biofalconch ★ 1.3k
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1
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703
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Comment: Comment: Randomizing reads for Salmon
2.1 years ago by biofalconch ★ 1.3k
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804
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Comment: Comment: Gtf or GFF with target genes regulated by ncRNAs
2.1 years ago by biofalconch ★ 1.3k
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708
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Comment: Comment: Conserved and novel miRNA analysis
2.1 years ago by biofalconch ★ 1.3k
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1.4k
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Comment: Comment: Quantification of allele-specific gene expression in RNA-seq
2.1 years ago by biofalconch ★ 1.3k
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1.4k
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Comment: Comment: Quantification of allele-specific gene expression in RNA-seq
2.1 years ago by biofalconch ★ 1.3k
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5.9k
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Comment: Comment: subset data problem
2.1 years ago by biofalconch ★ 1.3k
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1.2k
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Comment: Comment: Read groups in RNA-seq
2.1 years ago by biofalconch ★ 1.3k
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1.2k
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Comment: Comment: Read groups in RNA-seq
2.1 years ago by biofalconch ★ 1.3k
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1.2k
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Comment: Comment: WGS sequencing data based proteomics analysis
2.2 years ago by biofalconch ★ 1.3k
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1.2k
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Comment: Comment: WGS sequencing data based proteomics analysis
2.2 years ago by biofalconch ★ 1.3k
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1
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1.2k
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Comment: Comment: Does sequencing depth influencing ATAC peak calling?
2.2 years ago by biofalconch ★ 1.3k
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2.0k
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Comment: Comment: CDHIT para and cdhit slow speed
2.2 years ago by biofalconch ★ 1.3k
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2
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1.2k
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Answer: Answer: Convert with respect to first column (repeated values) into rows (transposon)
2.2 years ago by biofalconch ★ 1.3k
2
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0
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643
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Comment: Comment: The correct RNA-seq Reference genome
2.2 years ago by biofalconch ★ 1.3k
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0
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1.9k
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Comment: Comment: GSEA documentation
2.2 years ago by biofalconch ★ 1.3k
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1
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2.4k
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Comment: Comment: Violin Plot
2.2 years ago by biofalconch ★ 1.3k
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647
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Comment: Comment: In RepeatMasker output out file, what does the repeat class/family "DNA" mean?
2.2 years ago by biofalconch ★ 1.3k
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1
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1.9k
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Comment: Comment: GSEA documentation
2.2 years ago by biofalconch ★ 1.3k
1
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1
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1.9k
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Answer: Answer: GSEA documentation
2.2 years ago by biofalconch ★ 1.3k
1
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1
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1.9k
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Comment: Comment: Use giraffe in vg
2.2 years ago by biofalconch ★ 1.3k
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0
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703
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Comment: Comment: Different alignment results on mirnaseq data upon using Bowtie vs Bowtie2.
2.2 years ago by biofalconch ★ 1.3k
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879
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Comment: Comment: Stringtie problem
2.2 years ago by biofalconch ★ 1.3k
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1.3k
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Comment: Comment: Utilization of STAR Output for RNA-seq Analysis
2.2 years ago by biofalconch ★ 1.3k
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0
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787
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Comment: Comment: merging bam file
2.2 years ago by biofalconch ★ 1.3k
1
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1
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1.3k
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Comment: Comment: Utilization of STAR Output for RNA-seq Analysis
2.2 years ago by biofalconch ★ 1.3k
0
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1
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1.9k
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Comment: Comment: Analize RNA-seq data using Hisat2
2.2 years ago by biofalconch ★ 1.3k
0
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1
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4.9k
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Comment: Comment: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
2.2 years ago by biofalconch ★ 1.3k
0
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1
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1.8k
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Comment: Comment: Transcript quantification
2.2 years ago by biofalconch ★ 1.3k
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0
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790
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Comment: Comment: Best practice for normalizing sequencing depth for differential miRNA expression
2.2 years ago by biofalconch ★ 1.3k
1
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0
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898
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Answer: Answer: Need help regarding miRNA data analysis
2.2 years ago by biofalconch ★ 1.3k
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1
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1.0k
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Answer: Answer: How to draw a picture like this?
2.3 years ago by biofalconch ★ 1.3k
2
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0
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1.3k
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Comment: Comment: Seurat
2.3 years ago by biofalconch ★ 1.3k
2
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1
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772
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Answer: Answer: conda env error?
2.3 years ago by biofalconch ★ 1.3k
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0
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6.4k
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Comment: Comment: How to split a scRNA reads BAM or FASTQ file to a separate file for each cell by
2.3 years ago by biofalconch ★ 1.3k
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1
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6.4k
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Answer: Answer: How to split a scRNA reads BAM or FASTQ file to a separate file for each cell by
2.3 years ago by biofalconch ★ 1.3k
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0
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671
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Comment: Comment: What happens if you run an already soft-masked sequence on RepeatMasker again?
2.6 years ago by biofalconch ★ 1.3k
2
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1
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3.5k
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Comment: Comment: Error when runing Bowtie2: (ERR): bowtie2-align exited with value 1
2.6 years ago by biofalconch ★ 1.3k
0
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1
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7.1k
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Comment: Comment: Cellranger count pipestance failed: The read lengths are incompatible with all t
3.2 years ago by biofalconch ★ 1.3k
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0
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1.0k
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Comment: Comment: Merging bam files
3.2 years ago by biofalconch ★ 1.3k
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1
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1.1k
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Answer: Answer: HMM Profile-Profile alignment
3.3 years ago by biofalconch ★ 1.3k
1
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1
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1.9k
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Answer: Answer: Featurecounts
3.4 years ago by biofalconch ★ 1.3k
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