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1.2k
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Comment: Comment: Weird edgeR normalization results for one tissue
8 days ago by rfran010 ★ 1.7k
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615
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Comment: Comment: Interpreting genomic features distribution for CUT&RUN peaks
20 days ago by rfran010 ★ 1.7k
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605
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Comment: Comment: how to respond that my research does not have experimental validation
25 days ago by rfran010 ★ 1.7k
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1
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522
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Comment: Comment: tximport error (medianLengthOverIsoform)
28 days ago by rfran010 ★ 1.7k
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6.6k
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Comment: Comment: Issue with renaming genes in expression matrix for heatmap in R
7 weeks ago by rfran010 ★ 1.7k
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1
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1.6k
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Comment: Comment: Inverted TSS Enrichment Plot
3 months ago by rfran010 ★ 1.7k
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3.5k
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Comment: Comment: why bwa-mem only return one read with pair-read end
3 months ago by rfran010 ★ 1.7k
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0
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504
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Comment: Comment: Identification problem of IDE-8 cell on culture with inverted microscope
3 months ago by rfran010 ★ 1.7k
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0
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801
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Comment: Comment: UCSC genome browser negative strand positions
4 months ago by rfran010 ★ 1.7k
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0
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806
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Comment: Comment: PCA interpretation
4 months ago by rfran010 ★ 1.7k
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4.3k
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Comment: Comment: Weird p-value distribution on edgeR results
4 months ago by rfran010 ★ 1.7k
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677
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Comment: Comment: MultiQC report - unique reads from sequence counts
4 months ago by rfran010 ★ 1.7k
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1
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855
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Comment: Comment: MACS3 Parameter adjustments
4 months ago by rfran010 ★ 1.7k
1
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0
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835
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Answer: Answer: RNA-seq: TPM batch effect correction
4 months ago by rfran010 ★ 1.7k
2
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0
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613
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Comment: Comment: How to address conflicting circRNA expression results between public datasets an
4 months ago by rfran010 ★ 1.7k
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1
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855
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Comment: Comment: MACS3 Parameter adjustments
4 months ago by rfran010 ★ 1.7k
2
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0
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457
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Comment: Comment: Quantification for small RNAseq data
4 months ago by rfran010 ★ 1.7k
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675
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Comment: Comment: Bootstrapping in RNA-seq
4 months ago by rfran010 ★ 1.7k
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608
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Comment: Comment: featureCounts -t option not working in v2.0.8?
4 months ago by rfran010 ★ 1.7k
2
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1
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871
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Comment: Comment: Log2FC track Visualization in IGV
4 months ago by rfran010 ★ 1.7k
1
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0
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562
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Answer: Answer: Read1 and read2 asymmetry in stranded, paired-end rnaseq data aligned by STAR
4 months ago by rfran010 ★ 1.7k
1
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1
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578
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Comment: Comment: comparison interpretation
4 months ago by rfran010 ★ 1.7k
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0
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716
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Answer: Answer: Does the order of SplitNCigarReads and MarkDuplicates affect RNA-seq variant cal
4 months ago by rfran010 ★ 1.7k
1
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1
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608
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Comment: Comment: featureCounts -t option not working in v2.0.8?
4 months ago by rfran010 ★ 1.7k
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0
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414
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Comment: Comment: should I remove the transcripts from annotate peak region in ATAC-seq
4 months ago by rfran010 ★ 1.7k
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0
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599
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Answer: Answer: ATAC seq: from peaks to differential analysis ??
4 months ago by rfran010 ★ 1.7k
2
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1
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1.3k
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Comment: Comment: Heatmap for visualizing the differentially expressed genes in RNA-seq data
4 months ago by rfran010 ★ 1.7k
1
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0
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626
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Answer: Answer: HISAT2 or STAR
4 months ago by rfran010 ★ 1.7k
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0
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2.1k
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Comment: Comment: STAR alignment not detecting some transcripts / custom reference
5 months ago by rfran010 ★ 1.7k
0
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0
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2.1k
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Comment: Comment: STAR alignment not detecting some transcripts / custom reference
5 months ago by rfran010 ★ 1.7k
0
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1
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2.1k
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Comment: Comment: STAR alignment not detecting some transcripts / custom reference
5 months ago by rfran010 ★ 1.7k
0
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0
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1.2k
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Comment: Comment: RNAseq meta-analysis to identify “consistently expressed” genes
5 months ago by rfran010 ★ 1.7k
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0
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1.0k
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Comment: Comment: Bulk RNA-seq differential gene expression analysis on haplotype‑resolved diploid
5 months ago by rfran010 ★ 1.7k
0
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0
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1.0k
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Comment: Comment: Bulk RNA-seq differential gene expression analysis on haplotype‑resolved diploid
5 months ago by rfran010 ★ 1.7k
0
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0
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2.1k
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Comment: Comment: STAR alignment not detecting some transcripts / custom reference
5 months ago by rfran010 ★ 1.7k
0
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1
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866
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Comment: Comment: Z-score for scRNA-seq data?
5 months ago by rfran010 ★ 1.7k
1
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1
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1.0k
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Comment: Comment: Bulk RNA-seq differential gene expression analysis on haplotype‑resolved diploid
5 months ago by rfran010 ★ 1.7k
0
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0
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846
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Comment: Comment: Unexpected negative correlation between gene-length and counts
5 months ago by rfran010 ★ 1.7k
1
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0
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592
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Comment: Comment: RNA-seq analysis
5 months ago by rfran010 ★ 1.7k
0
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0
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765
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Comment: Comment: deseq2 batch effect correction
5 months ago by rfran010 ★ 1.7k
1
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1
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765
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Comment: Comment: deseq2 batch effect correction
6 months ago by rfran010 ★ 1.7k
1
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0
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818
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Comment: Comment: Interpretation of the results: PCA
6 months ago by rfran010 ★ 1.7k
0
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0
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935
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Comment: Comment: Exon-level counts via featureCounts
6 months ago by rfran010 ★ 1.7k
0
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0
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783
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Comment: Comment: GTF repeatmasker annotation file
6 months ago by rfran010 ★ 1.7k
0
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1
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783
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Comment: Comment: GTF repeatmasker annotation file
6 months ago by rfran010 ★ 1.7k
2
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1
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808
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Answer: Answer: Question About Handling Technical Replicates in ATAC-seq
6 months ago by rfran010 ★ 1.7k
3
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0
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1.5k
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Comment: Comment: Heatmap problem in R
7 months ago by rfran010 ★ 1.7k
0
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0
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770
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Comment: Comment: Impact of the number of PCs on the clustering in scRNA seq
7 months ago by rfran010 ★ 1.7k
1
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0
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528
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Comment: Comment: Infer amino acid alignment from pairwise nucleotide alignment
8 months ago by rfran010 ★ 1.7k
1
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1
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611
views
Comment: Comment: Potential mapping issues in Cas9 knockout cells with STAR (the truncated RNA)
8 months ago by rfran010 ★ 1.7k
314 results • Page 1 of 7
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