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Comment: Comment: Is there a proper way to choose bins in barplot
3 months ago by QX ▴ 70
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1
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614
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Comment: Comment: Is there a proper way to choose bins in barplot
3 months ago by QX ▴ 70
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614
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Comment: Comment: Is there a proper way to choose bins in barplot
3 months ago by QX ▴ 70
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1.4k
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Comment: Comment: Gatk haplotyper
6 months ago by QX ▴ 70
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1
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709
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Comment: Comment: coordinate vs contributions for the variables in PCA using FactoMineR
6 months ago by QX ▴ 70
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709
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Comment: Comment: coordinate vs contributions for the variables in PCA using FactoMineR
6 months ago by QX ▴ 70
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991
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Comment: Comment: PCA for count data
6 months ago by QX ▴ 70
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991
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Comment: Comment: PCA for count data
6 months ago by QX ▴ 70
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1
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991
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Comment: Comment: PCA for count data
6 months ago by QX ▴ 70
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736
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Comment: Comment: DEseq2 with different designs matrix
7 months ago by QX ▴ 70
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1.4k
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Comment: Comment: difference between macs2 callpeak using bam and bed file
8 months ago by QX ▴ 70
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1.4k
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Comment: Comment: difference between macs2 callpeak using bam and bed file
8 months ago by QX ▴ 70
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725
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Comment: Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
8 months ago by QX ▴ 70
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3.7k
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Comment: Comment: ATAC-seq peak calling
8 months ago by QX ▴ 70
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868
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Comment: Comment: call peak for all replicates in all conditions using macs2
8 months ago by QX ▴ 70
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868
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Comment: Comment: call peak for all replicates in all conditions using macs2
8 months ago by QX ▴ 70
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1
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725
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Comment: Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
8 months ago by QX ▴ 70
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2.4k
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Comment: Comment: How get density plot TSS region for genes of interest
8 months ago by QX ▴ 70
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11k
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Comment: Comment: Using featureCounts and DESeq2 to look at differences between ATAC-seq condition
8 months ago by QX ▴ 70
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2.4k
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Comment: Comment: How get density plot TSS region for genes of interest
8 months ago by QX ▴ 70
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1
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1.3k
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Comment: Comment: which bed file should be used for deeptools computeMatrix
8 months ago by QX ▴ 70
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1
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1.3k
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Comment: Comment: which bed file should be used for deeptools computeMatrix
8 months ago by QX ▴ 70
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2.3k
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Comment: Comment: Plotting chip signal at TSSs with deeptools
8 months ago by QX ▴ 70
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742
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Comment: Comment: MACS2 for multiple conditions in ATACseq analysis
9 months ago by QX ▴ 70
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1
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742
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Comment: Comment: MACS2 for multiple conditions in ATACseq analysis
9 months ago by QX ▴ 70
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6.8k
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Comment: Comment: How to create SAF from text file for FeatureCounts
9 months ago by QX ▴ 70
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1
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1.2k
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Comment: Comment: featureCounts output
9 months ago by QX ▴ 70
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687
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Comment: Comment: is that statistical correct to use DEseq2 for proteomics data
9 months ago by QX ▴ 70
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915
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Comment: Comment: Increase the memory and core usage of R
9 months ago by QX ▴ 70
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1.2k
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Comment: Comment: featureCounts output
9 months ago by QX ▴ 70
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0
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1.2k
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Comment: Comment: featureCounts output
9 months ago by QX ▴ 70
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0
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1.2k
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Comment: Comment: featureCounts output
9 months ago by QX ▴ 70
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1
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989
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
9 months ago by QX ▴ 70
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989
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
9 months ago by QX ▴ 70
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1
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989
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
9 months ago by QX ▴ 70
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1.2k
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Comment: Comment: best way to submit hpc job using snakemake
9 months ago by QX ▴ 70
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1
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1.2k
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Comment: Comment: best way to submit hpc job using snakemake
9 months ago by QX ▴ 70
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1
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561
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Comment: Comment: snakemake config file with path
9 months ago by QX ▴ 70
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627
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Comment: Comment: Any recommended way to view scRNAseq results in an interactive format?
9 months ago by QX ▴ 70
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1.3k
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Comment: Comment: Calling variants/SNP for single-cell RNA-seq data
10 months ago by QX ▴ 70
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743
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Comment: Comment: bash for merging bam files by samtools
10 months ago by QX ▴ 70
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0
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778
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Comment: Comment: scRNA integration problem with cluster not being separated
10 months ago by QX ▴ 70
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0
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940
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Comment: Comment: chIP-seq vs ATACseq analysis
10 months ago by QX ▴ 70
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1
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778
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Comment: Comment: scRNA integration problem with cluster not being separated
10 months ago by QX ▴ 70
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0
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6.4k
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Comment: Comment: Different bigwig file sizes between BedgraphToBigwig and bamCoverage
10 months ago by QX ▴ 70
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1
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6.4k
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Comment: Comment: Different bigwig file sizes between BedgraphToBigwig and bamCoverage
10 months ago by QX ▴ 70
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0
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1.3k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
10 months ago by QX ▴ 70
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1
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1.3k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
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1.3k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
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2
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1.3k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
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