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2
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Answer: Answer: Isoform analysis after quantification with Salmon/Star
10 days ago by Gordon Smyth ★ 8.2k
2
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0
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758
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Comment: Comment: Mass-spectrometry proteomics
11 days ago by Gordon Smyth ★ 8.2k
0
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0
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327
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Job: Lab Head positions at the WEHI, Melbourne Australia
LabHead Australia JobPosting
17 days ago by Gordon Smyth ★ 8.2k
1
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1
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758
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Comment: Comment: Mass-spectrometry proteomics
22 days ago by Gordon Smyth ★ 8.2k
2
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1
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758
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Answer: Answer: Mass-spectrometry proteomics
23 days ago by Gordon Smyth ★ 8.2k
0
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0
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936
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Comment: Comment: RNA-seq analysis
4 weeks ago by Gordon Smyth ★ 8.2k
1
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1
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936
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Comment: Comment: RNA-seq analysis
4 weeks ago by Gordon Smyth ★ 8.2k
1
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1
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936
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Comment: Comment: RNA-seq analysis
5 weeks ago by Gordon Smyth ★ 8.2k
4
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1
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936
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Answer: Answer: RNA-seq analysis
5 weeks ago by Gordon Smyth ★ 8.2k
3
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1
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565
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Answer: Answer: Design matrix with uneven patient representation across stages
5 weeks ago by Gordon Smyth ★ 8.2k
4
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0
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674
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Answer: Answer: differential exon usage from Salmon outputs
6 weeks ago by Gordon Smyth ★ 8.2k
1
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1
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805
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Comment: Comment: Limma model gives weird results
8 weeks ago by Gordon Smyth ★ 8.2k
2
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0
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1.6k
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Answer: Answer: How do you do differential splicing using edgeR command diffSpliceDGE?
9 weeks ago by Gordon Smyth ★ 8.2k
1
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0
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670
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Answer: Answer: Using DEXseq on kallisto tsv outputs ?
9 weeks ago by Gordon Smyth ★ 8.2k
1
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0
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887
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Comment: Comment: Methods for directional pathway analysis of DEGs?
10 weeks ago by Gordon Smyth ★ 8.2k
1
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1
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887
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Answer: Answer: Methods for directional pathway analysis of DEGs?
10 weeks ago by Gordon Smyth ★ 8.2k
1
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0
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554
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Answer: Answer: How to obtain TPM data after batch effect correction from count data obtained us
11 weeks ago by Gordon Smyth ★ 8.2k
1
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0
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816
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Answer: Answer: How to rank genes for GSEA using edgeR-LRT results ?
3 months ago by Gordon Smyth ★ 8.2k
0
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0
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816
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Comment: Comment: How to rank genes for GSEA using edgeR-LRT results ?
3 months ago by Gordon Smyth ★ 8.2k
0
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0
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7.3k
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Comment: Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
3 months ago by Gordon Smyth ★ 8.2k
0
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0
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1.9k
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Comment: Comment: Use limma for correlation analysis of RNA-seqdata and continous trait
3 months ago by Gordon Smyth ★ 8.2k
0
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0
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750
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Comment: Comment: Proteomics Data Analysis
4 months ago by Gordon Smyth ★ 8.2k
0
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1
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750
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Answer: Answer: Proteomics Data Analysis
4 months ago by Gordon Smyth ★ 8.2k
3
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1
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609
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Answer: Answer: Using limma on a very low ammount of genes
4 months ago by Gordon Smyth ★ 8.2k
1
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0
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1.1k
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Comment: Comment: Differential Expression for a predefined one or multiple genes and multiple tes
5 months ago by Gordon Smyth ★ 8.2k
3
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1
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1.0k
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Answer: Answer: Create the correct contrast in limma when want to combine 2 or more groups
5 months ago by Gordon Smyth ★ 8.2k
1
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1
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1.0k
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Comment: Comment: Create the correct contrast in limma when want to combine 2 or more groups
5 months ago by Gordon Smyth ★ 8.2k
2
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1
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1.1k
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Answer: Answer: Differential Expression for a predefined one or multiple genes and multiple tes
6 months ago by Gordon Smyth ★ 8.2k
2
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0
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695
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Answer: Answer: Bonferroni correction for burden by transcripts
6 months ago by Gordon Smyth ★ 8.2k
1
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0
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939
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Answer: Answer: Conceptual and statistical help in creating a synthetic RNAseq cohort from a rea
6 months ago by Gordon Smyth ★ 8.2k
1
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1
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1.3k
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Comment: Comment: Feature Counts - potential bug with outfile.jcounts
6 months ago by Gordon Smyth ★ 8.2k
1
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0
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800
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Comment: Comment: Is this featureCounts output normal, and how can I process it for DESeq2 analysi
7 months ago by Gordon Smyth ★ 8.2k
1
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1
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800
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Answer: Answer: Is this featureCounts output normal, and how can I process it for DESeq2 analysi
7 months ago by Gordon Smyth ★ 8.2k
0
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0
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1.2k
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Comment: Comment: Handling Negative Values in Log-Transformed a Dataset for Differential Expressi
7 months ago by Gordon Smyth ★ 8.2k
4
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1
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751
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Answer: Answer: Biostatistics
7 months ago by Gordon Smyth ★ 8.2k
0
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1
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1.2k
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Comment: Comment: Handling Negative Values in Log-Transformed a Dataset for Differential Expressi
7 months ago by Gordon Smyth ★ 8.2k
1
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0
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964
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Answer: Answer: how to run limma for large datasets
7 months ago by Gordon Smyth ★ 8.2k
2
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1
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1.1k
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Answer: Answer: [construct a model.matrix ]
7 months ago by Gordon Smyth ★ 8.2k
2
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1
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1.2k
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Answer: Answer: Handling Negative Values in Log-Transformed a Dataset for Differential Expressi
7 months ago by Gordon Smyth ★ 8.2k
1
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0
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1.4k
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Answer: Answer: gene ID to gene symbol in R
8 months ago by Gordon Smyth ★ 8.2k
1
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1
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1.9k
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Comment: Comment: Which Should Take Priority When Selecting DEGs: FDR or Log Fold Change?
8 months ago by Gordon Smyth ★ 8.2k
3
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1
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1.9k
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Answer: Answer: Which Should Take Priority When Selecting DEGs: FDR or Log Fold Change?
8 months ago by Gordon Smyth ★ 8.2k
6
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0
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2.3k
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Answer: Answer: How does edgeR's filterByExpr work?
8 months ago by Gordon Smyth ★ 8.2k
1
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0
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2.3k
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Comment: Comment: How does edgeR's filterByExpr work?
8 months ago by Gordon Smyth ★ 8.2k
0
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1
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2.2k
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Comment: Comment: Does the order of the batch variable matter in Limma design matrix?
9 months ago by Gordon Smyth ★ 8.2k
1
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0
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1.8k
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
9 months ago by Gordon Smyth ★ 8.2k
1
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1
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1.8k
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
9 months ago by Gordon Smyth ★ 8.2k
0
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2
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1.8k
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
9 months ago by Gordon Smyth ★ 8.2k
1
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1
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1.8k
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Answer: Answer: Kallisto: to scaledTPM or not to scaledTPM
9 months ago by Gordon Smyth ★ 8.2k
0
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0
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1.2k
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Comment: Comment: Seeking Advice on Using `edgeR` and `variancePartition` for RNA-seq Data with Mu
9 months ago by Gordon Smyth ★ 8.2k
567 results • Page 1 of 12
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