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Answer: Answer: Is total miRNA in EV constant? Implications for library size normalization.
23 hours ago by Gordon Smyth ★ 8.3k
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1
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11k
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Answer: Answer: how to download gene annotation for NCBI GENE ID
29 days ago by Gordon Smyth ★ 8.3k
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1
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1.2k
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Comment: Comment: Does edgeR supports random effects?
6 weeks ago by Gordon Smyth ★ 8.3k
5
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1
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1.2k
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Answer: Answer: Does edgeR supports random effects?
6 weeks ago by Gordon Smyth ★ 8.3k
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0
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632
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Answer: Answer: Question about anova-like test using Limma
8 weeks ago by Gordon Smyth ★ 8.3k
2
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1
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502
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Answer: Answer: A question about model matrix and contrast
8 weeks ago by Gordon Smyth ★ 8.3k
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608
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Answer: Answer: Loss of strandedness in the Illumina Strandedness Total RNA protocol
9 weeks ago by Gordon Smyth ★ 8.3k
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1.3k
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Comment: Comment: How to rank genes for GSEA using edgeR-LRT results ?
9 weeks ago by Gordon Smyth ★ 8.3k
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1
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4.1k
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Comment: Comment: Weird p-value distribution on edgeR results
10 weeks ago by Gordon Smyth ★ 8.3k
2
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1
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4.1k
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Answer: Answer: Weird p-value distribution on edgeR results
10 weeks ago by Gordon Smyth ★ 8.3k
2
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0
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707
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Answer: Answer: Isoform analysis after quantification with Salmon/Star
3 months ago by Gordon Smyth ★ 8.3k
2
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1
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987
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Comment: Comment: Mass-spectrometry proteomics
3 months ago by Gordon Smyth ★ 8.3k
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0
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933
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Job: Lab Head positions at the WEHI, Melbourne Australia
LabHead Australia JobPosting
3 months ago by Gordon Smyth ★ 8.3k
1
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1
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987
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Comment: Comment: Mass-spectrometry proteomics
3 months ago by Gordon Smyth ★ 8.3k
2
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1
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987
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Answer: Answer: Mass-spectrometry proteomics
3 months ago by Gordon Smyth ★ 8.3k
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0
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1.2k
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Comment: Comment: RNA-seq analysis
3 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.2k
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Comment: Comment: RNA-seq analysis
3 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.2k
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Comment: Comment: RNA-seq analysis
4 months ago by Gordon Smyth ★ 8.3k
4
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1
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1.2k
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Answer: Answer: RNA-seq analysis
4 months ago by Gordon Smyth ★ 8.3k
3
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1
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766
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Answer: Answer: Design matrix with uneven patient representation across stages
4 months ago by Gordon Smyth ★ 8.3k
4
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0
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842
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Answer: Answer: differential exon usage from Salmon outputs
4 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.0k
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Comment: Comment: Limma model gives weird results
4 months ago by Gordon Smyth ★ 8.3k
2
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0
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1.8k
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Answer: Answer: How do you do differential splicing using edgeR command diffSpliceDGE?
4 months ago by Gordon Smyth ★ 8.3k
1
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0
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766
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Answer: Answer: Using DEXseq on kallisto tsv outputs ?
5 months ago by Gordon Smyth ★ 8.3k
1
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0
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1.1k
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Comment: Comment: Methods for directional pathway analysis of DEGs?
5 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.1k
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Answer: Answer: Methods for directional pathway analysis of DEGs?
5 months ago by Gordon Smyth ★ 8.3k
1
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0
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697
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Answer: Answer: How to obtain TPM data after batch effect correction from count data obtained us
5 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.3k
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Answer: Answer: How to rank genes for GSEA using edgeR-LRT results ?
5 months ago by Gordon Smyth ★ 8.3k
1
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0
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1.3k
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Comment: Comment: How to rank genes for GSEA using edgeR-LRT results ?
5 months ago by Gordon Smyth ★ 8.3k
0
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0
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8.0k
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Comment: Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
5 months ago by Gordon Smyth ★ 8.3k
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0
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2.2k
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Comment: Comment: Use limma for correlation analysis of RNA-seqdata and continous trait
5 months ago by Gordon Smyth ★ 8.3k
0
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0
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948
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Comment: Comment: Proteomics Data Analysis
7 months ago by Gordon Smyth ★ 8.3k
0
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1
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948
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Answer: Answer: Proteomics Data Analysis
7 months ago by Gordon Smyth ★ 8.3k
3
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1
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765
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Answer: Answer: Using limma on a very low ammount of genes
7 months ago by Gordon Smyth ★ 8.3k
1
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0
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1.3k
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Comment: Comment: Differential Expression for a predefined one or multiple genes and multiple tes
8 months ago by Gordon Smyth ★ 8.3k
3
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1
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1.4k
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Answer: Answer: Create the correct contrast in limma when want to combine 2 or more groups
8 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.4k
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Comment: Comment: Create the correct contrast in limma when want to combine 2 or more groups
8 months ago by Gordon Smyth ★ 8.3k
2
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1
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1.3k
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Answer: Answer: Differential Expression for a predefined one or multiple genes and multiple tes
8 months ago by Gordon Smyth ★ 8.3k
2
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0
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814
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Answer: Answer: Bonferroni correction for burden by transcripts
8 months ago by Gordon Smyth ★ 8.3k
1
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0
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1.1k
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Answer: Answer: Conceptual and statistical help in creating a synthetic RNAseq cohort from a rea
9 months ago by Gordon Smyth ★ 8.3k
1
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1
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1.5k
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Comment: Comment: Feature Counts - potential bug with outfile.jcounts
9 months ago by Gordon Smyth ★ 8.3k
1
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0
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919
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Comment: Comment: Is this featureCounts output normal, and how can I process it for DESeq2 analysi
9 months ago by Gordon Smyth ★ 8.3k
1
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1
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919
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Answer: Answer: Is this featureCounts output normal, and how can I process it for DESeq2 analysi
9 months ago by Gordon Smyth ★ 8.3k
0
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0
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1.5k
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Comment: Comment: Handling Negative Values in Log-Transformed a Dataset for Differential Expressi
9 months ago by Gordon Smyth ★ 8.3k
4
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1
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886
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Answer: Answer: Biostatistics
9 months ago by Gordon Smyth ★ 8.3k
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1
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1.5k
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Comment: Comment: Handling Negative Values in Log-Transformed a Dataset for Differential Expressi
9 months ago by Gordon Smyth ★ 8.3k
1
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0
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1.1k
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Answer: Answer: how to run limma for large datasets
10 months ago by Gordon Smyth ★ 8.3k
2
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1
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1.3k
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Answer: Answer: [construct a model.matrix ]
10 months ago by Gordon Smyth ★ 8.3k
2
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1
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1.5k
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Answer: Answer: Handling Negative Values in Log-Transformed a Dataset for Differential Expressi
10 months ago by Gordon Smyth ★ 8.3k
1
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0
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1.7k
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Answer: Answer: gene ID to gene symbol in R
10 months ago by Gordon Smyth ★ 8.3k
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