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3
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Answer: Answer: Is it normal for most data to be lost when filtering data?
3.6 years ago by Gordon Smyth ★ 8.3k
3
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1
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1.7k
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Answer: Answer: I have problem with pairwise comparison in estimate dispersion functions in edge
3.6 years ago by Gordon Smyth ★ 8.3k
3
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1
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3.6k
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Comment: Comment: Technical replicates in Microarray data
3.6 years ago by Gordon Smyth ★ 8.3k
2
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5
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3.6k
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Answer: Answer: Technical replicates in Microarray data
3.6 years ago by Gordon Smyth ★ 8.3k
0
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0
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1.9k
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Answer: Answer: Microaaray in R, Agilent two colour
3.6 years ago by Gordon Smyth ★ 8.3k
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1.9k
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Comment: Comment: Microaaray in R, Agilent two colour
3.6 years ago by Gordon Smyth ★ 8.3k
1
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1
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2.9k
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Answer: Answer: Selecting the correct experimental design for edgeR differential expression anal
3.7 years ago by Gordon Smyth ★ 8.3k
1
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1
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2.9k
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Comment: Comment: Selecting the correct experimental design for edgeR differential expression anal
3.7 years ago by Gordon Smyth ★ 8.3k
1
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1
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2.9k
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Comment: Comment: Selecting the correct experimental design for edgeR differential expression anal
3.7 years ago by Gordon Smyth ★ 8.3k
2
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1
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2.3k
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Comment: Comment: Batch effect correction: Input data format for removeBatchEffect from limma pack
3.7 years ago by Gordon Smyth ★ 8.3k
4
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2.1k
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Answer: Answer: DEG analysis from Salmon quantification of 3' TagSeq reads with unannotated refe
3.7 years ago by Gordon Smyth ★ 8.3k
3
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1
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2.3k
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Answer: Answer: Batch effect correction: Input data format for removeBatchEffect from limma pack
3.7 years ago by Gordon Smyth ★ 8.3k
1
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0
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3.8k
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Answer: Answer: BAM to Fastq
3.7 years ago by Gordon Smyth ★ 8.3k
0
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1
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2.7k
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Answer: Answer: How to generate a Venn diagram from edgeR DEG results?
3.8 years ago by Gordon Smyth ★ 8.3k
0
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1
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2.2k
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Comment: Comment: design matrix not of full RANK in paired design
3.8 years ago by Gordon Smyth ★ 8.3k
4
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1
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2.2k
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Answer: Answer: design matrix not of full RANK in paired design
3.8 years ago by Gordon Smyth ★ 8.3k
2
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0
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1.2k
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Answer: Answer: Differential expression analysis (DEA) of lncRNA
3.9 years ago by Gordon Smyth ★ 8.3k
0
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0
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1.2k
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Answer: Answer: How to extract beta coefficients from edgeR output
3.9 years ago by Gordon Smyth ★ 8.3k
1
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0
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902
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Answer: Answer: EdgeR exclude 0 count subjects for each gene
3.9 years ago by Gordon Smyth ★ 8.3k
1
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1
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2.1k
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Answer: Answer: For Gene ontology analysis in R by using edge R and limma
3.9 years ago by Gordon Smyth ★ 8.3k
1
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1
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5.4k
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Answer: Answer: Rsubread FeatureCounts return 0.0% assigned
3.9 years ago by Gordon Smyth ★ 8.3k
1
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1
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4.0k
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Comment: Comment: What will the the classic approach is to make pairwise comparisons between th
3.9 years ago by Gordon Smyth ★ 8.3k
1
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1
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4.0k
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Comment: Comment: What will the the classic approach is to make pairwise comparisons between th
3.9 years ago by Gordon Smyth ★ 8.3k
0
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0
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2.5k
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Answer: Answer: Problems in differential expression analysis with edgeR
3.9 years ago by Gordon Smyth ★ 8.3k
1
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1
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4.0k
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Comment: Comment: What will the the classic approach is to make pairwise comparisons between th
3.9 years ago by Gordon Smyth ★ 8.3k
1
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2
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4.0k
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Comment: Comment: What will the the classic approach is to make pairwise comparisons between th
3.9 years ago by Gordon Smyth ★ 8.3k
1
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1
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4.0k
views
Answer: Answer: What will the the classic approach is to make pairwise comparisons between th
3.9 years ago by Gordon Smyth ★ 8.3k
1
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0
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5.4k
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Comment: Comment: Rsubread FeatureCounts return 0.0% assigned
3.9 years ago by Gordon Smyth ★ 8.3k
0
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0
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1.9k
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Comment: Comment: how to process the raw data of illumina Arrays( Illumina HumanHT-12 V4.0 express
4.0 years ago by Gordon Smyth ★ 8.3k
0
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0
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2.5k
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Comment: Comment: Repeated measures design matrix controlling for covariates age and sex
4.0 years ago by Gordon Smyth ★ 8.3k
2
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1
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1.9k
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Answer: Answer: how to process the raw data of illumina Arrays( Illumina HumanHT-12 V4.0 express
4.0 years ago by Gordon Smyth ★ 8.3k
1
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0
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2.5k
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Answer: Answer: Repeated measures design matrix controlling for covariates age and sex
4.0 years ago by Gordon Smyth ★ 8.3k
1
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0
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5.1k
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Comment: Comment: edgeR design matrix error not of full rank
4.0 years ago by Gordon Smyth ★ 8.3k
3
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0
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2.9k
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Comment: Comment: Misuse of RPKM or TPM normalization when comparing across samples and sequencing
4.0 years ago by Gordon Smyth ★ 8.3k
2
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0
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2.9k
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Answer: Answer: Misuse of RPKM or TPM normalization when comparing across samples and sequencing
4.0 years ago by Gordon Smyth ★ 8.3k
0
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1
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5.1k
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Comment: Comment: edgeR design matrix error not of full rank
4.0 years ago by Gordon Smyth ★ 8.3k
4
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1
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5.1k
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Answer: Answer: edgeR design matrix error not of full rank
4.0 years ago by Gordon Smyth ★ 8.3k
1
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0
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2.4k
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Comment: Comment: limma+voom flips the sign of the effect from CPM?
4.0 years ago by Gordon Smyth ★ 8.3k
0
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0
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2.4k
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Comment: Comment: limma+voom flips the sign of the effect from CPM?
4.0 years ago by Gordon Smyth ★ 8.3k
0
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1
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2.4k
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Answer: Answer: limma+voom flips the sign of the effect from CPM?
4.0 years ago by Gordon Smyth ★ 8.3k
1
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0
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3.0k
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Comment: Comment: voom mean-variance plot has set of genes where variance increases with expressio
4.0 years ago by Gordon Smyth ★ 8.3k
1
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1
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3.0k
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Comment: Comment: voom mean-variance plot has set of genes where variance increases with expressio
4.0 years ago by Gordon Smyth ★ 8.3k
2
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1
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3.0k
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Answer: Answer: voom mean-variance plot has set of genes where variance increases with expressio
4.0 years ago by Gordon Smyth ★ 8.3k
1
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1
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1.8k
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Answer: Answer: Combining RNA-Seq read counts from 2 lanes of the same sample (.txt file)
4.0 years ago by Gordon Smyth ★ 8.3k
1
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0
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1.5k
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Comment: Comment: Multiple hypothesis correction with multiple gene sets
4.0 years ago by Gordon Smyth ★ 8.3k
0
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2
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1.5k
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Answer: Answer: Multiple hypothesis correction with multiple gene sets
4.0 years ago by Gordon Smyth ★ 8.3k
0
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0
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2.3k
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Comment: Comment: TMM followed by inverse normal transform
4.0 years ago by Gordon Smyth ★ 8.3k
0
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0
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669
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Job: Postdoctoral Scientist in Statistical Bioinformatics and Software Development, WEHI, Melbourne, Australia
Australia
4.0 years ago by Gordon Smyth ★ 8.3k
5
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1
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2.3k
views
Answer: Answer: TMM followed by inverse normal transform
4.0 years ago by Gordon Smyth ★ 8.3k
1
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0
replies
1.3k
views
Comment: Comment: featureCounts: unable to find chromosome in SAM header
4.1 years ago by Gordon Smyth ★ 8.3k
577 results • Page 7 of 12
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