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Comment: Comment: Best Practices For Using Fimo For Motif Scanning
updated 2.1 years ago by 43k • written 9.2 years ago by ▴ 100
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Comment: Comment: Help in cufflinks -- all the FPKM values are 0
updated 2.1 years ago by 43k • written 9.2 years ago by ▴ 100
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Answer: Answer: use bedtools to find overlaps of bed and gff files
updated 2.1 years ago by 43k • written 9.2 years ago by ▴ 100
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Comment: Comment: Best Practices For Using Fimo For Motif Scanning
updated 2.1 years ago by 43k • written 9.2 years ago by ▴ 100
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Comment: C: Difference between TFBS Perl/Biopython motif search and FIMO
9.2 years ago by Vishaka Datta ▴ 100
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Answer: Answer: Problems aboout Cufflinks results
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 100
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Difference between TFBS Perl/Biopython motif search and FIMO
fimo motif search ChIP-Seq biopython
9.3 years ago by Vishaka Datta ▴ 100
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Comment: Comment: How is FPKM variability handled?
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 100
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Comment: Comment: How is FPKM variability handled?
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 100
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Answer: Answer: How is FPKM variability handled?
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 100
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