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Answer: A: SeqIO error: local variable 'qual' referenced before assignment
3.7 years ago by Peter 6.0k
1
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0
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7.5k
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Answer: A: BioPython SeqRecord attributes
updated 4.3 years ago by 43k • written 9.9 years ago by 6.0k
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0
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3.7k
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Answer: A: Processing Blast XML output generated by GNU Parallel with Biopython SearchIO
updated 4.3 years ago by 43k • written 10.0 years ago by 6.0k
2
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1
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8.7k
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Answer: A: Question for Biopython Installation on Mac OS X
updated 4.3 years ago by 43k • written 10.0 years ago by 6.0k
3
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0
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10k
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Answer: A: How to create a Blast database of viruses ?
updated 4.3 years ago by 43k • written 10.0 years ago by 6.0k
3
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1
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3.3k
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Answer: A: Biopython: renaming SeqRecords using dictionary values
updated 4.4 years ago by 43k • written 8.4 years ago by 6.0k
3
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1
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4.1k
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Answer: A: How To Have Only Id And Sequence Printed In Output After Parse Sequences From A
updated 4.4 years ago by 43k • written 11.9 years ago by 6.0k
1
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0
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4.2k
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Answer: A: SeqIO.write() in biopython is extremely slow
updated 4.4 years ago by 43k • written 8.4 years ago by 6.0k
2
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0
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4.0k
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Answer: A: No output in local blast using biopython
updated 4.4 years ago by 43k • written 8.4 years ago by 6.0k
2
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0
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3.9k
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Answer: A: Biopython error parsing feature locations in GenBank file
updated 4.4 years ago by 43k • written 8.4 years ago by 6.0k
0
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1
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4.9k
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Answer: A: Get distances between atoms with Bio.PDB
updated 4.4 years ago by 43k • written 8.5 years ago by 6.0k
1
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0
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8.5k
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Answer: A: Convert .ab1/.abi sequence file to FASTA?
updated 4.5 years ago by 43k • written 8.7 years ago by 6.0k
0
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1
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3.6k
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Answer: A: No soft-clipping in BWA 0.7.10 anymore?
updated 4.5 years ago by 43k • written 9.2 years ago by 6.0k
1
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5
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6.3k
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Answer: A: Find Amino Acid Change For Snp Using Eutils
updated 4.6 years ago by 43k • written 12.6 years ago by 6.0k
4
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0
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6.0k
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Answer: A: Psi-Blast Commandline Version Using Biopython
updated 4.6 years ago by 43k • written 12.8 years ago by 6.0k
3
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6
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6.6k
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Answer: A: Biostar Flyer For Outreach
updated 4.6 years ago by 43k • written 13.5 years ago by 6.0k
10
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1
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14k
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Answer: A: Perl Script For Retrieval Of Gene Sequence (In Fasta Format) From Ncbi
updated 4.6 years ago by 43k • written 13.2 years ago by 6.0k
1
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0
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5.9k
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Answer: A: Windows Cmd Not Responding With Python Blastall 2.2.17
updated 4.6 years ago by 43k • written 10.2 years ago by 6.0k
7
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1
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4.4k
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Answer: A: Biopython Ncbistandalone Blastall Gives Different Result Than Calling Blastall D
updated 4.7 years ago by 43k • written 13.6 years ago by 6.0k
5
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2
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10k
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Answer: A: Problem With Blastp Of Biopython: Returned Non-Zero Exit Status 1
updated 4.7 years ago by 43k • written 13.6 years ago by 6.0k
1
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0
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26k
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Answer: A: Computing The Reverse And Complement Of A Sequence With Biopython
updated 4.7 years ago by 43k • written 14.1 years ago by 6.0k
5
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0
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55k
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Answer: A: Extracting Multiple Fasta Sequences At A Time From A File Containing Many Sequen
updated 4.7 years ago by 43k • written 11.9 years ago by 6.0k
0
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0
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5.9k
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Answer: A: How To Show More Blast Results Using Biopython?
updated 4.7 years ago by 43k • written 13.6 years ago by 6.0k
1
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2
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8.5k
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Answer: A: Indexing Compressed Fastq-Like Data
updated 5.1 years ago by 43k • written 12.4 years ago by 6.0k
0
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1
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1.8k
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Answer: A: Code for splitting long string into Genbank record gives error
5.2 years ago by Peter 6.0k
2
votes
0
replies
12k
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Answer: A: The Longest Chromosome > Sizeof(Int32)
updated 5.2 years ago by 43k • written 9.8 years ago by 6.0k
1
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0
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3.6k
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Answer: A: Biopython Not Indexing (Or Parsing) Full .Sff File, Why?
updated 5.2 years ago by 43k • written 10.6 years ago by 6.0k
5
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1
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5.3k
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Answer: A: (solved) I couldn't reproduce the problem of max_target_seqs
5.5 years ago by Peter 6.0k
0
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0
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1.7k
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Answer: A: set chromosome width in biopython
updated 5.6 years ago by 43k • written 8.2 years ago by 6.0k
4
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1
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8.3k
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Answer: A: How Do I Create A Seqrecord In Biopython?
updated 5.6 years ago by 43k • written 14.0 years ago by 6.0k
1
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0
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1.7k
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Answer: A: Is the order of descriptions and alignments identical while iterating over the B
6.5 years ago by Peter 6.0k
0
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0
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2.2k
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Answer: A: Blast-XML and Biopython: extract query-anchored results (i.e. MSA)
6.5 years ago by Peter 6.0k
1
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0
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1.3k
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Answer: A: Galaxy local update
6.7 years ago by Peter 6.0k
1
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0
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1.9k
views
Answer: A: SeqIO.parse reading a 200bp FASTA sequence as 132bp
6.7 years ago by Peter 6.0k
2
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1
reply
3.2k
views
Answer: A: Biopython: work with loops and qualifiers from multiple records
6.8 years ago by Peter 6.0k
3
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0
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6.0k
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Answer: A: how to extract coordinates from Two PDB files and how to calculate all atom t
7.1 years ago by Peter 6.0k
0
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1
reply
7.8k
views
Answer: A: Error: Dssp With Biopython
7.1 years ago by Peter 6.0k
1
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0
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1.8k
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Answer: A: BioPython: How to set the order of qualifiers
7.8 years ago by Peter 6.0k
0
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0
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5.7k
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Answer: A: Combine multiple fasta files in galaxy?
7.8 years ago by Peter 6.0k
0
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0
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2.0k
views
Answer: A: blaSTorage intallation problem
8.1 years ago by Peter 6.0k
1
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0
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1.9k
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Answer: A: I have a genbank file and a list of addresses. I'd like to pull the exact nucle
8.1 years ago by Peter 6.0k
1
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0
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3.8k
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Answer: A: Extract old_locus_tag information from genbank files
8.1 years ago by Peter 6.0k
1
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1
reply
3.2k
views
Answer: A: Help: do I always have to re-open sequence file within a for loop in python?
8.1 years ago by Peter 6.0k
1
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0
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5.6k
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Answer: A: Can Bio.Blast.NCBIXML somehow parse the stdout from NcbipsiblastCommandline so t
8.2 years ago by Peter 6.0k
0
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0
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2.2k
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Answer: A: How do I get SeqIO.write() to make a genbank file that includes the REFERENCE fi
8.2 years ago by Peter 6.0k
2
votes
0
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5.0k
views
Answer: Answer: How to write FULL genbank files with Biopython SeqIO module?
updated 21 months ago by 43k • written 8.2 years ago by 6.0k
0
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0
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3.7k
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Answer: A: Biopython drops GenBank LOCUS data?
8.3 years ago by Peter 6.0k
4
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1
reply
4.7k
views
Answer: A: Emboss In Biopython Asequence And Bsequence
8.4 years ago by Peter 6.0k
1
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0
replies
3.6k
views
Answer: A: How to parse Blast output from new XML2 format with taxid and sciname?
8.5 years ago by Peter 6.0k
1
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0
replies
1.7k
views
Answer: A: Bio.Blast and Blast version compatability
8.5 years ago by Peter 6.0k
197 results • Page 1 of 4
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