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Comment: C: Any advice for a de novo genome assembly
8.8 years ago by Brian Bushnell 20k
2
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1
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9.5k
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Comment: C: Target fragment size versus final insert size
8.8 years ago by Brian Bushnell 20k
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1
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9.5k
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Comment: C: Target fragment size versus final insert size
8.8 years ago by Brian Bushnell 20k
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7.9k
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Comment: C: SAMTOOLS flagstat outputs
8.8 years ago by Brian Bushnell 20k
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1
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3.1k
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Comment: C: ProDeGe: a computational protocol for fully automated decontamination of genomes
8.8 years ago by Brian Bushnell 20k
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1
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2.5k
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Comment: C: Tool to identify group pair distance & other metrics from FASTQ files
8.8 years ago by Brian Bushnell 20k
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3.1k
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Comment: C: ProDeGe: a computational protocol for fully automated decontamination of genomes
8.8 years ago by Brian Bushnell 20k
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6.2k
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Answer: A: shannon entropy score
8.8 years ago by Brian Bushnell 20k
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2
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3.1k
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Comment: C: ProDeGe: a computational protocol for fully automated decontamination of genomes
8.8 years ago by Brian Bushnell 20k
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0
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14k
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Comment: C: Converting large (compressed and unsorted) BAM files to fastq
8.8 years ago by Brian Bushnell 20k
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1
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14k
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Comment: C: Converting large (compressed and unsorted) BAM files to fastq
8.8 years ago by Brian Bushnell 20k
1
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1
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14k
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Comment: C: Converting large (compressed and unsorted) BAM files to fastq
8.8 years ago by Brian Bushnell 20k
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1.8k
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Answer: A: Assembling long similar contigs
8.8 years ago by Brian Bushnell 20k
3
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3
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14k
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Answer: A: Converting large (compressed and unsorted) BAM files to fastq
8.8 years ago by Brian Bushnell 20k
1
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0
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14k
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Comment: C: Converting large (compressed and unsorted) BAM files to fastq
8.8 years ago by Brian Bushnell 20k
1
vote
1
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7.0k
views
Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
2
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1
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3.2k
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Answer: A: the formula which calculate the rate of heterozygosity in kmer analysis
8.9 years ago by Brian Bushnell 20k
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3.2k
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Comment: C: the formula which calculate the rate of heterozygosity in kmer analysis
8.9 years ago by Brian Bushnell 20k
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0
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3.1k
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Comment: C: Splitting SAM/BAM alignments
8.9 years ago by Brian Bushnell 20k
0
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0
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1.6k
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Comment: C: Value in performing whole genome sequencing on sample size of 1
8.9 years ago by Brian Bushnell 20k
1
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1
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1.6k
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Comment: C: Value in performing whole genome sequencing on sample size of 1
8.9 years ago by Brian Bushnell 20k
1
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2
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1.6k
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Answer: A: Value in performing whole genome sequencing on sample size of 1
8.9 years ago by Brian Bushnell 20k
0
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2
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7.0k
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Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
0
votes
1
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7.0k
views
Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
0
votes
1
reply
7.0k
views
Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
0
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2
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7.0k
views
Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
0
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1
reply
7.0k
views
Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
0
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0
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2.0k
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Comment: C: WXS kmer over-representation post trimming.
8.9 years ago by Brian Bushnell 20k
2
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3
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7.0k
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Comment: C: Any advice for a de novo genome assembly
8.9 years ago by Brian Bushnell 20k
1
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0
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2.5k
views
Answer: A: Extracting fastq files, based on their fasta counterparts
8.9 years ago by Brian Bushnell 20k
1
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1
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2.9k
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Comment: C: BBMap : NH:i:1 and XT:A:R
8.9 years ago by Brian Bushnell 20k
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0
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3.8k
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Comment: C: BBMAP outputs multimapped reads in ambiguous=toss
8.9 years ago by Brian Bushnell 20k
1
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1
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20k
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Comment: C: Bowtie 2 - is there a way to discard reads mapping to multiple locations?
8.9 years ago by Brian Bushnell 20k
4
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1
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11k
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Answer: A: How do people know to use at least 30X coverage in WGS?
8.9 years ago by Brian Bushnell 20k
1
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0
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3.4k
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Answer: A: Mapping using multiple reference sequences
8.9 years ago by Brian Bushnell 20k
1
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0
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2.5k
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Answer: A: Count right and left mate pairs from Sam files
8.9 years ago by Brian Bushnell 20k
1
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0
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2.2k
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Answer: A: IMG Tables download
8.9 years ago by Brian Bushnell 20k
0
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1
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3.8k
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Comment: C: BBMAP outputs multimapped reads in ambiguous=toss
8.9 years ago by Brian Bushnell 20k
1
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0
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2.0k
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Comment: C: trimming more than two paired mates
8.9 years ago by Brian Bushnell 20k
0
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0
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11k
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Comment: C: Extract sequence from fasta using primer
9.0 years ago by Brian Bushnell 20k
2
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2
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11k
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Answer: A: Extract sequence from fasta using primer
9.0 years ago by Brian Bushnell 20k
1
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0
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3.0k
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Answer: A: How to convert multiple .fa file to .fastq in Shell
9.0 years ago by Brian Bushnell 20k
0
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1
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1.8k
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Comment: C: Identifying my WGS isolates
9.0 years ago by Brian Bushnell 20k
0
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0
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5.8k
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Comment: C: What is the format of *.contigs.fasta files?
9.0 years ago by Brian Bushnell 20k
0
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1
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5.8k
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Comment: C: What is the format of *.contigs.fasta files?
9.0 years ago by Brian Bushnell 20k
1
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1
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5.8k
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Comment: C: What is the format of *.contigs.fasta files?
9.0 years ago by Brian Bushnell 20k
0
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0
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3.3k
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Comment: C: Aligning using Bowtie2
9.0 years ago by Brian Bushnell 20k
0
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0
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4.3k
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Answer: A: How can I remove adapter sequence from illumina 2000 paired end data?
9.0 years ago by Brian Bushnell 20k
5
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1
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45k
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Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
0
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1
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45k
views
Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
2,083 results • Page 28 of 42
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