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Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
1
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1
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45k
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Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
0
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2
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45k
views
Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
13
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3
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45k
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Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
2
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1
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45k
views
Comment: C: Trimming adapter sequences - is it necessary?
9.0 years ago by Brian Bushnell 20k
4
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1
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2.5k
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Comment: C: What do you work on while waiting on your programs to finish?
9.0 years ago by Brian Bushnell 20k
0
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0
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3.4k
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Comment: C: How to increase the speed of subread for DNA whole genome sequence
9.0 years ago by Brian Bushnell 20k
0
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1
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3.4k
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Comment: C: How to increase the speed of subread for DNA whole genome sequence
9.0 years ago by Brian Bushnell 20k
2
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1
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5.6k
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Answer: A: Trim adapter sequence for sing-end
9.0 years ago by Brian Bushnell 20k
1
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2
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3.6k
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Answer: A: sequencing depth and number of reads
9.1 years ago by Brian Bushnell 20k
2
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0
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13k
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Answer: A: What is the exact definition for scaffold?
9.1 years ago by Brian Bushnell 20k
2
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0
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4.5k
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Answer: A: unpaired R1 and R2 sequences
9.1 years ago by Brian Bushnell 20k
1
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0
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4.7k
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Comment: C: Trimmomatic did a massive trimming!!!
9.1 years ago by Brian Bushnell 20k
0
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0
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6.2k
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Comment: C: Assembling de novo with multiple versions of paired-end reads
9.1 years ago by Brian Bushnell 20k
1
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1
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6.2k
views
Comment: C: Assembling de novo with multiple versions of paired-end reads
9.1 years ago by Brian Bushnell 20k
0
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0
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3.5k
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Answer: A: COLLAPSED READS VS OVERLAPPING PAIRED-END READS !!??
9.1 years ago by Brian Bushnell 20k
0
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1
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6.2k
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Comment: C: Assembling de novo with multiple versions of paired-end reads
9.1 years ago by Brian Bushnell 20k
1
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0
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1.6k
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Comment: C: What file size should I expect after fastx_clipper (original fasta file is 7.9GB
9.1 years ago by Brian Bushnell 20k
0
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1
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22k
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Comment: C: Merging two fastq files
9.1 years ago by Brian Bushnell 20k
5
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1
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22k
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Answer: A: Merging two fastq files
9.1 years ago by Brian Bushnell 20k
0
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1
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18k
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Comment: C: Tool to separate human and mouse rna seq reads
9.1 years ago by Brian Bushnell 20k
0
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1
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2.3k
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Comment: C: running SOAP using 32G RAM
9.1 years ago by Brian Bushnell 20k
1
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1
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7.6k
views
Comment: C: illumina quality trimming - FASTQC
9.1 years ago by Brian Bushnell 20k
1
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1
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14k
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Comment: C: RNA-seq differential expression analysis, which aligner to choose between BWA/to
9.1 years ago by Brian Bushnell 20k
1
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1
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14k
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Comment: C: RNA-seq differential expression analysis, which aligner to choose between BWA/to
9.1 years ago by Brian Bushnell 20k
2
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0
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4.1k
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Comment: C: Sorting sequences according header
9.1 years ago by Brian Bushnell 20k
0
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1
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2.0k
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Comment: C: Untrimmed reads in small-RNA seq datasets
9.1 years ago by Brian Bushnell 20k
2
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1
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4.1k
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Comment: C: Estimate total number of KMERs from a FASTQ file
9.1 years ago by Brian Bushnell 20k
1
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1
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2.8k
views
Comment: C: What does these characters mean ?!!
9.1 years ago by Brian Bushnell 20k
5
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1
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2.8k
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Answer: A: What does these characters mean ?!!
9.1 years ago by Brian Bushnell 20k
0
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0
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2.1k
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Answer: C: optimum number of short reads for denovo assembly
9.1 years ago by Brian Bushnell 20k
1
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0
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4.0k
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Comment: C: Generating random DNA sequence and paired-end alignment
9.1 years ago by Brian Bushnell 20k
0
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0
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11k
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Comment: C: Looking for reputable tool to find low complexity regions in FASTQ or BAM files
9.1 years ago by Brian Bushnell 20k
0
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1
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3.6k
views
Comment: C: Merging all left / all right reads before STAR align?
9.1 years ago by Brian Bushnell 20k
0
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6
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4.6k
views
Answer: A: accession to taxid for fasta files downloaded from refseq
9.1 years ago by Brian Bushnell 20k
1
vote
1
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2.9k
views
Comment: C: NGS analysis with a core i3 laptop
9.1 years ago by Brian Bushnell 20k
0
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1
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2.2k
views
Comment: C: How to splice the genome into many 700bp fragments ramdonly
9.1 years ago by Brian Bushnell 20k
0
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0
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2.5k
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Comment: C: Finding alignment score for multi-read frombam/sam file
9.1 years ago by Brian Bushnell 20k
0
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1
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18k
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Comment: C: Retrieve a subset of FASTA from large Illumina multi-FASTA file
9.1 years ago by Brian Bushnell 20k
2
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1
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1.9k
views
Comment: C: Implementation of Alignment with convex gap penalty
9.1 years ago by Brian Bushnell 20k
1
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0
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18k
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Comment: C: Retrieve a subset of FASTA from large Illumina multi-FASTA file
9.1 years ago by Brian Bushnell 20k
0
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0
replies
18k
views
Comment: C: Retrieve a subset of FASTA from large Illumina multi-FASTA file
9.1 years ago by Brian Bushnell 20k
2
votes
2
replies
2.5k
views
Comment: C: Finding alignment score for multi-read frombam/sam file
9.1 years ago by Brian Bushnell 20k
0
votes
1
reply
2.2k
views
Answer: A: How to splice the genome into many 700bp fragments ramdonly
9.1 years ago by Brian Bushnell 20k
1
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0
replies
3.2k
views
Comment: C: tophat output summary
9.1 years ago by Brian Bushnell 20k
1
vote
1
reply
4.1k
views
Comment: C: I want to store a docker image reproducing a paper. Is there a host for docker i
9.1 years ago by Brian Bushnell 20k
0
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0
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14k
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Comment: C: How to extract all the mapped reads from bwa output
9.1 years ago by Brian Bushnell 20k
1
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0
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1.9k
views
Comment: C: finding novel sequences : blastn or alignment against nr database ?
9.1 years ago by Brian Bushnell 20k
1
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1
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6.0k
views
Comment: C: choosing a suitable max intron size for STAR (plant alignment)
9.1 years ago by Brian Bushnell 20k
0
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0
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2.6k
views
Comment: C: Simulating read errors in a FASTQ file
9.1 years ago by Brian Bushnell 20k
2,083 results • Page 29 of 42
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