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Comment: Comment: Read count vs Depth
9 hours ago by Brian Bushnell 20k
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1
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324
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Answer: Answer: Read count vs Depth
1 day ago by Brian Bushnell 20k
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3
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1.3k
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Comment: Comment: Building reference dbSNP file using WGS samples
3 days ago by Brian Bushnell 20k
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0
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153
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Comment: Comment: Java error while running HiCDC overview code
4 days ago by Brian Bushnell 20k
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1
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602
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Comment: Comment: Which language use as a beginner in Bioinformatics and Computational genomics
5 days ago by Brian Bushnell 20k
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1
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602
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Comment: Comment: Which language use as a beginner in Bioinformatics and Computational genomics
5 days ago by Brian Bushnell 20k
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1
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479
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Comment: Comment: From TPM to raw counts
7 days ago by Brian Bushnell 20k
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1
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400
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Comment: Comment: Using metagenome assembly and binning to identify and mitigate contamination in
7 days ago by Brian Bushnell 20k
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1
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264
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Answer: Answer: Low coverage whole genome sequencing reveal excess heterozygosity for multiple S
7 days ago by Brian Bushnell 20k
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0
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400
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Comment: Comment: Using metagenome assembly and binning to identify and mitigate contamination in
7 days ago by Brian Bushnell 20k
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0
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345
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Comment: Comment: How Can I move the scattered dots more closer into the center of box ?
7 days ago by Brian Bushnell 20k
4
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0
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488
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Comment: Comment: Problematic fastq files...How can we trust them?
7 days ago by Brian Bushnell 20k
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1
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673
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Comment: Comment: How to filter .fasta file based on conditional statement
8 days ago by Brian Bushnell 20k
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0
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394
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Comment: Comment: How to deeply sequence long inserts
10 days ago by Brian Bushnell 20k
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1
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394
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Comment: Comment: How to deeply sequence long inserts
10 days ago by Brian Bushnell 20k
2
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0
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321
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Comment: Comment: SPAdes error: finished abnormally, OS return value: 21
10 days ago by Brian Bushnell 20k
3
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1
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321
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Answer: Answer: SPAdes error: finished abnormally, OS return value: 21
11 days ago by Brian Bushnell 20k
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1
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346
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Answer: Answer: subset a bam file
13 days ago by Brian Bushnell 20k
0
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1
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398
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Comment: Comment: selection of reference genome
14 days ago by Brian Bushnell 20k
1
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1
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466
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Answer: Answer: SNPs of a specific mouse strain
15 days ago by Brian Bushnell 20k
3
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1
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398
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Answer: Answer: selection of reference genome
15 days ago by Brian Bushnell 20k
0
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0
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588
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Comment: Comment: BLAST hits on viruses relate to different host than used
15 days ago by Brian Bushnell 20k
2
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1
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1.1k
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Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
15 days ago by Brian Bushnell 20k
0
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1
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673
views
Comment: Comment: How to filter .fasta file based on conditional statement
15 days ago by Brian Bushnell 20k
4
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1
reply
673
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Answer: Answer: How to filter .fasta file based on conditional statement
15 days ago by Brian Bushnell 20k
1
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1
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609
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Answer: Answer: Working with NCBI downloadable Datasets
16 days ago by Brian Bushnell 20k
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0
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609
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Comment: Comment: Working with NCBI downloadable Datasets
16 days ago by Brian Bushnell 20k
1
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0
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255
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Answer: Answer: Find all locations of aligned reads with MQ (Mapping Quality) = 0.
16 days ago by Brian Bushnell 20k
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0
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674
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Comment: Comment: AVX error with Deepvariant caller
16 days ago by Brian Bushnell 20k
2
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0
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503
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Answer: Answer: Is there a good software to generate test genomics data?
14 days ago by Brian Bushnell 20k
2
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0
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222
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Answer: Answer: Shorten Illumina reads
16 days ago by Brian Bushnell 20k
0
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1
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674
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Comment: Comment: AVX error with Deepvariant caller
17 days ago by Brian Bushnell 20k
0
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0
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277
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Comment: Comment: Regarding using a "pseudo reference genome" for aligning short reads
17 days ago by Brian Bushnell 20k
0
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1
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300
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Comment: Comment: Jellyfish problem with Failed to open input file 'reads.jf'
17 days ago by Brian Bushnell 20k
2
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1
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1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
18 days ago by Brian Bushnell 20k
1
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0
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1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
18 days ago by Brian Bushnell 20k
1
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2
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1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
18 days ago by Brian Bushnell 20k
0
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0
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363
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Answer: Answer: Novaseq read coverage needed for demultiplexing
19 days ago by Brian Bushnell 20k
0
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1
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955
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Comment: Comment: Poly-A trimming for WGBS
19 days ago by Brian Bushnell 20k
1
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0
replies
1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
20 days ago by Brian Bushnell 20k
1
vote
1
reply
1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
20 days ago by Brian Bushnell 20k
2
votes
0
replies
1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
20 days ago by Brian Bushnell 20k
0
votes
1
reply
1.1k
views
Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
20 days ago by Brian Bushnell 20k
1
vote
0
replies
1.7k
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Answer: Answer: BaseRecalibrator takes forever to run. Any suggestions?
20 days ago by Brian Bushnell 20k
0
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1
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323
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Comment: Comment: Query regarding callsets used as known sites in Variant Calling
20 days ago by Brian Bushnell 20k
4
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3
replies
1.1k
views
Answer: Answer: Bbtools callvariant multisample mode, + base recalibration
20 days ago by Brian Bushnell 20k
0
votes
1
reply
955
views
Comment: Comment: Poly-A trimming for WGBS
22 days ago by Brian Bushnell 20k
0
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0
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323
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Comment: Comment: Conceptual question about open reading frames
23 days ago by Brian Bushnell 20k
0
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0
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182
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Answer: Answer: Trimming pair end fastq files merged not interleaved
23 days ago by Brian Bushnell 20k
0
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1
reply
955
views
Answer: Answer: Poly-A trimming for WGBS
23 days ago by Brian Bushnell 20k
2,029 results • Page 1 of 41
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