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0
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0
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16k
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Comment:
Comment: How to identify 16s sequences from binning data(contigs)?
3 months ago by
Brian Bushnell
20k
1
vote
0
replies
780
views
Answer:
Answer: bbduk.sh trimming to BAM output file
3 months ago by
Brian Bushnell
20k
4
votes
0
replies
400
views
Tool:
High Resolution Imaging of Illumina Flowcell Surface Properties
Illumina
NovaSeqX
bbtools
5 months ago by
Brian Bushnell
20k
1
vote
0
replies
1.3k
views
Comment:
Comment: Using BBtools to remove polyGs in Illumina data
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
663
views
Answer:
Answer: Integration of paired and single-end SRA
9 months ago by
Brian Bushnell
20k
1
vote
0
replies
2.1k
views
Comment:
Comment: Find all sequences with adapters without trimming them off
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
0
votes
1
reply
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
1
vote
1
reply
2.5k
views
Answer:
Answer: KeepBothReads in Trimmomatic
9 months ago by
Brian Bushnell
20k
2
votes
0
replies
691
views
Answer:
Answer: How can you determine the mutation rate of mitochondrial DNA for your (Grasshopp
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.1k
views
Comment:
Comment: Awesome awesomeness bioinformatics
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
2.1k
views
Answer:
Answer: Trimmomatic or Cutadapt not Trimming my Adapters even though I see them clearly
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
667
views
Comment:
Comment: Aedes vexans RNA-seq de novo assembly
9 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.2k
views
Answer:
Answer: Understanding bedtools coverage for datasets with in-dels.
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
960
views
Comment:
Comment: Drawing circular and linear mitochondrial genome diagrams
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
1.9k
views
Comment:
Comment: High Detection of Duplication in RNAseq dataset
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
649
views
Comment:
Comment: SNPs profile on chromosome 1 curve
9 months ago by
Brian Bushnell
20k
0
votes
1
reply
2.1k
views
Answer:
Answer: Find all sequences with adapters without trimming them off
9 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.1k
views
Answer:
Answer: Awesome awesomeness bioinformatics
9 months ago by
Brian Bushnell
20k
0
votes
1
reply
2.2k
views
Answer:
Answer: comparison between a selected genes of a new strain and the same genes of the re
9 months ago by
Brian Bushnell
20k
0
votes
1
reply
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
0
votes
2
replies
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
0
votes
1
reply
4.2k
views
Comment:
Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
9 months ago by
Brian Bushnell
20k
0
votes
0
replies
628
views
Answer:
Answer: Genomic Context Analysis
9 months ago by
Brian Bushnell
20k
26
votes
21
replies
4.2k
views
6 follow
Tool:
New Illumina error mode, new BBTools release (39.09) to deal with it
assembly
NovaSeqX
Illumina
poly-G
bbtools
updated 5 months ago by
GenoMax
152k • written 9 months ago by
Brian Bushnell
20k
1
vote
1
reply
956
views
Answer:
Answer: Is it possible to have a mitochondrial genome of size 30-40kbp in insects?
11 months ago by
Brian Bushnell
20k
0
votes
0
replies
2.0k
views
Comment:
Comment: Introducing NovaDemux, a Sequence Demultiplexer that Increases Yield and Salvage
11 months ago by
Brian Bushnell
20k
1
vote
1
reply
2.2k
views
Comment:
Comment: BBMap Excess Fold Coverage
13 months ago by
Brian Bushnell
20k
1
vote
0
replies
2.2k
views
Comment:
Comment: BBMap Excess Fold Coverage
13 months ago by
Brian Bushnell
20k
0
votes
0
replies
2.0k
views
Comment:
Comment: Introducing NovaDemux, a Sequence Demultiplexer that Increases Yield and Salvage
13 months ago by
Brian Bushnell
20k
0
votes
0
replies
2.0k
views
Comment:
Comment: Introducing NovaDemux, a Sequence Demultiplexer that Increases Yield and Salvage
13 months ago by
Brian Bushnell
20k
1
vote
4
replies
2.0k
views
Tool:
Introducing NovaDemux, a Sequence Demultiplexer that Increases Yield and Salvages Failed Runs
NovaDemux
NovaSeq
Illumina
Demultiplexing
Barcode
11 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.1k
views
Comment:
Comment: bbmerge (bbmap) ~ error with insert size file output
14 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.3k
views
Comment:
Comment: How to assure that sequence consensus is genuine?
15 months ago by
Brian Bushnell
20k
0
votes
0
replies
1.7k
views
Answer:
Answer: cutadapt tool
16 months ago by
Brian Bushnell
20k
0
votes
0
replies
832
views
Answer:
Answer: Sequence Duplication Levels in targeted sequencing
16 months ago by
Brian Bushnell
20k
0
votes
0
replies
5.9k
views
Answer:
Answer: how to know what adapter sequences to trim for RNA-seq?
16 months ago by
Brian Bushnell
20k
1
vote
0
replies
1.4k
views
Answer:
Answer: Variant caller for Ion Torrent data
16 months ago by
Brian Bushnell
20k
3
votes
0
replies
2.7k
views
Answer:
Answer: Processing fastq files for genome assembly
16 months ago by
Brian Bushnell
20k
3
votes
0
replies
20k
views
Answer:
Answer: Generating consensus sequence from bam file
16 months ago by
Brian Bushnell
20k
0
votes
0
replies
1.5k
views
Answer:
Answer: Target deletions with adaptive sampling
16 months ago by
Brian Bushnell
20k
2
votes
0
replies
1.7k
views
Answer:
Answer: Getting fasta file from the VCF after variant calling
16 months ago by
Brian Bushnell
20k
0
votes
1
reply
2.3k
views
Comment:
Comment: bbmap reds lenght from fastq
16 months ago by
Brian Bushnell
20k
0
votes
1
reply
9.2k
views
Comment:
Comment: Randomize Read Order In Multigbp Fastq File?
16 months ago by
Brian Bushnell
20k
0
votes
0
replies
2.0k
views
Comment:
Comment: Aligner with statistics included?
17 months ago by
Brian Bushnell
20k
1
vote
0
replies
4.1k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
17 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.3k
views
Comment:
Comment: Pair ended short reads assemble to multiple references with a plasmid also insid
19 months ago by
Brian Bushnell
20k
0
votes
0
replies
3.2k
views
Comment:
Comment: Individual vs. joint call VCFs
19 months ago by
Brian Bushnell
20k
2,083 results • Page
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