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Showing :
answers
1
vote
0
replies
2.2k
views
Answer:
A: CWL: Allowed values for parameters
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.6k
views
Answer:
A: --preserve_environment with docker containers?
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
876
views
Answer:
A: valid names for unique identifier
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.2k
views
Answer:
A: CWL: specifing one or more argument
6.6 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
1
reply
3.5k
views
Answer:
A: CWL: word counting
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.0k
views
Answer:
A: CWL: Docker image as input parameter (for reference genome files)
6.6 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
1.4k
views
Answer:
A: Does CWL have a search path for commadlinetools?
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.5k
views
Answer:
A: cwl job input file
6.6 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
4.1k
views
Answer:
A: CWL: combine two arrays as workflow step input
6.9 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
2.2k
views
Answer:
A: CWL question: File location vs path
6.9 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
3.5k
views
Answer:
A: cwl: how to add optional input as one element or as array of elements ?
6.9 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
1.9k
views
Answer:
A: Warning message: [outdir] is not a file, ignoring
6.9 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
2.3k
views
Answer:
A: How process inputs based on a filename pattern using CWL
6.9 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
1.3k
views
Answer:
A: CWL decision making/loop-back
7.0 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
3.4k
views
Answer:
A: CWL: SLurm Job Sheduler
7.0 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
1.7k
views
Answer:
A: CWL: glob patterns must not start with '/'
7.0 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
3.0k
views
Answer:
A: CWL: Problems with path to my python script.
7.0 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.7k
views
Answer:
A: CWL: SoftwareRequirement definition
7.0 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
1
reply
2.7k
views
Answer:
A: CWL: Comments in Common Workflow Language
7.0 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
4.7k
views
Answer:
A: CWL: Getting the outputs(File) of a command line tool
7.0 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.7k
views
Answer:
A: Record inputs definition
7.0 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
1.7k
views
Answer:
A: CWL: Remove space between parameters
7.1 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
3
replies
4.4k
views
Answer:
A: CWL: Loops and if conditionals
7.1 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
2.9k
views
Answer:
A: CWL: How to parse output of steps in workflow
7.1 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.9k
views
Answer:
A: CWL: "Typed" file format
7.1 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.4k
views
Answer:
A: How to set exclusive parameters within a worklfow
7.1 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.6k
views
Answer:
A: How to pass exclusive parameters on the command line (cwl-runner)
7.1 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
3
replies
2.4k
views
Answer:
A: I get a KeyError:0 when trying to use scatter
7.2 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
1.7k
views
Answer:
A: cwl stderr management: Not all output in my outfile.
7.2 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
3.2k
views
Answer:
A: CWL: How to add multiple files from two input parameters of type FILE and DIRECT
7.2 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
4.9k
views
Answer:
A: CWL: Setting output directories for steps in a workflow
7.2 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
2
replies
2.7k
views
Answer:
A: How can I indicate the output directory of one step in a workflow as an input to
7.2 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.4k
views
Answer:
A: Split up record input when using scatter/gather
7.2 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
0
replies
2.3k
views
Answer:
A: How to plot workflow as image
7.3 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
3.8k
views
Answer:
A: CWL: reading filenames from another file in the runtime and treating them as fil
7.3 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.0k
views
Answer:
A: Staged files not visible with DockerRequirement
7.4 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
2
replies
1.8k
views
Answer:
A: Advice on rendering a config file
7.4 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.8k
views
Answer:
A: Advice on rendering a config file
7.4 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
2.9k
views
Answer:
A: CWL: outputBindings with secondaryFiles
7.4 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.9k
views
Answer:
A: CWL Release 1.0: Why having both default and valueFrom fields on WorkflowStepInp
7.4 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
2.1k
views
Answer:
A: cwl for h3abionet16s pipeline failing with non-docker option
7.4 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.8k
views
Answer:
A: Failing to use $mixin to include "global" settings
7.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
2.4k
views
Answer:
A: How to get created directories out of CWL tmp path
7.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
4.6k
views
Answer:
A: Create writable directory inside container before executing baseCommand. How to
7.5 years ago by
Michael R. Crusoe
★ 1.9k
4
votes
0
replies
2.1k
views
Answer:
A: How to convert File to array of File? Type mismatch between source and sink, Fil
7.5 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
2
replies
4.6k
views
Answer:
A: CWL: how to set default values
7.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.2k
views
Answer:
C: Runtime parameters request: average read/write speed & average total run time
7.6 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
1.7k
views
Answer:
A: make paths variable in .cwl workflows and corresponding -job files
7.6 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
1.5k
views
Answer:
A: rerunning workflows with --cachedir sometimes repeats steps despite no changes t
7.6 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
1.6k
views
Answer:
A: CWL : default value and label for argument
7.7 years ago by
Michael R. Crusoe
★ 1.9k
108 results • Page
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