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3
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1
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1.7k
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Answer: Answer: CWL and Arvados
3.1 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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1.5k
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Comment: Comment: CWL capture multiple output files with prefix
4.1 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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4.7k
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Comment: Comment: Is there a schema for CWL inputs/job files?
4.2 years ago by Michael R. Crusoe ★ 1.9k
0
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0
replies
1.3k
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Comment: Comment: cwl GATK GenotypeGVCFs error in linux due to quotes in filenames
4.2 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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1.1k
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Comment: Comment: CWL workflow - nested_crossproduct output
4.2 years ago by Michael R. Crusoe ★ 1.9k
0
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0
replies
975
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Comment: Comment: CWL input files as secondaryFiles JS
4.2 years ago by Michael R. Crusoe ★ 1.9k
0
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1
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1.0k
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Comment: Comment: Source incompatible with Sink
4.2 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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2.1k
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Comment: Comment: Parallelize CWL workflow over multiple instances on AWS
4.3 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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2.1k
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Comment: Comment: Parallelize CWL workflow over multiple instances on AWS
4.3 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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2.1k
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Comment: Comment: Parallelize CWL workflow over multiple instances on AWS
4.3 years ago by Michael R. Crusoe ★ 1.9k
0
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1
reply
1.6k
views
Comment: C: CWL workflow: setting default for array of integer input
4.6 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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3.2k
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Answer: A: cwl kubernetes support?
4.9 years ago by Michael R. Crusoe ★ 1.9k
1
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1
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4.6k
views
Answer: A: CWL: How to refer to input or scattered value of a step
5.0 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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1.2k
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Answer: A: CWL: Min and max for tool input values (float,int)
5.3 years ago by Michael R. Crusoe ★ 1.9k
6
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0
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1.2k
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News: CWL user support moving to https://cwl.discourse.group/; many thanks to Biostars for over 4 years of support!
cwl thanks
updated 2.3 years ago by 45k • written 5.9 years ago by ★ 1.9k
2
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1
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3.0k
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Comment: C: CWL: Using the "EnvVarRequirement" to pass an environment variable to a script
6.0 years ago by Michael R. Crusoe ★ 1.9k
2
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0
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1.5k
views
Answer: A: CWL: Does cwltool support to download both input file and its secondaryFiles rem
6.0 years ago by Michael R. Crusoe ★ 1.9k
2
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1
reply
2.0k
views
Answer: A: secondaryFiles where nameroot differs
6.0 years ago by Michael R. Crusoe ★ 1.9k
2
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0
replies
2.1k
views
Comment: C: Input specific output filenames
6.0 years ago by Michael R. Crusoe ★ 1.9k
1
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0
replies
2.0k
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Answer: A: how do I default to /dev/null in CommandLineTool
6.1 years ago by Michael R. Crusoe ★ 1.9k
2
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0
replies
2.0k
views
Answer: A: how do I default to /dev/null in CommandLineTool
6.1 years ago by Michael R. Crusoe ★ 1.9k
1
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1
reply
4.7k
views
Comment: C: Is there a schema for CWL inputs/job files?
6.1 years ago by Michael R. Crusoe ★ 1.9k
1
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0
replies
1.5k
views
Comment: C: cwltool "invalid field" error messages
6.1 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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3.5k
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Comment: C: Add an item from input to an output array in CWL
6.1 years ago by Michael R. Crusoe ★ 1.9k
0
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0
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3.5k
views
Comment: C: Parse CWL to graph data structure or database?
6.1 years ago by Michael R. Crusoe ★ 1.9k
0
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2
replies
3.5k
views
Comment: C: Add an item from input to an output array in CWL
6.1 years ago by Michael R. Crusoe ★ 1.9k
3
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1
reply
3.5k
views
Answer: A: Add an item from input to an output array in CWL
6.1 years ago by Michael R. Crusoe ★ 1.9k
1
vote
0
replies
1.9k
views
Comment: C: More examples of parser_v1.0.py usage?
6.1 years ago by Michael R. Crusoe ★ 1.9k
1
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1
reply
1.9k
views
Answer: A: More examples of parser_v1.0.py usage?
6.1 years ago by Michael R. Crusoe ★ 1.9k
1
vote
1
reply
2.1k
views
Answer: A: cwl glob all the output files in a directory
6.2 years ago by Michael R. Crusoe ★ 1.9k
1
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0
replies
3.5k
views
Comment: C: Parse CWL to graph data structure or database?
6.2 years ago by Michael R. Crusoe ★ 1.9k
0
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0
replies
2.6k
views
Answer: A: toil-cwl-runner on slurm: toil.batchSystems.singleMachine maxMemory limit?
6.2 years ago by Michael R. Crusoe ★ 1.9k
2
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0
replies
3.5k
views
Answer: A: Parse CWL to graph data structure or database?
6.3 years ago by Michael R. Crusoe ★ 1.9k
0
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0
replies
3.2k
views
Comment: C: CWL :Append the ref input used in toolkit
6.3 years ago by Michael R. Crusoe ★ 1.9k
1
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1
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3.2k
views
Comment: C: CWL :Append the ref input used in toolkit
6.3 years ago by Michael R. Crusoe ★ 1.9k
0
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0
replies
1.7k
views
Answer: A: Rename file in CWL ExpressionTool?
6.3 years ago by Michael R. Crusoe ★ 1.9k
2
votes
2
replies
3.2k
views
Answer: A: CWL :Append the ref input used in toolkit
6.3 years ago by Michael R. Crusoe ★ 1.9k
2
votes
1
reply
4.7k
views
Answer: A: Is there a schema for CWL inputs/job files?
6.3 years ago by Michael R. Crusoe ★ 1.9k
1
vote
0
replies
1.5k
views
Comment: C: interesting behavior with grep
6.3 years ago by Michael R. Crusoe ★ 1.9k
2
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1
reply
1.5k
views
Comment: C: interesting behavior with grep
6.3 years ago by Michael R. Crusoe ★ 1.9k
1
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0
replies
2.1k
views
Answer: A: CWL limit number of job instances created through scatter
6.3 years ago by Michael R. Crusoe ★ 1.9k
5
votes
1
reply
1.6k
views
Answer: A: Output going to stdout?
6.4 years ago by Michael R. Crusoe ★ 1.9k
5
votes
0
replies
3.8k
views
Answer: A: Markduplicates did not find output file with glob pattern
6.5 years ago by Michael R. Crusoe ★ 1.9k
3
votes
1
reply
3.8k
views
Comment: C: Markduplicates did not find output file with glob pattern
6.5 years ago by Michael R. Crusoe ★ 1.9k
3
votes
0
replies
3.8k
views
Comment: C: Markduplicates did not find output file with glob pattern
6.5 years ago by Michael R. Crusoe ★ 1.9k
1
vote
1
reply
3.8k
views
Comment: C: Markduplicates did not find output file with glob pattern
6.5 years ago by Michael R. Crusoe ★ 1.9k
0
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0
replies
2.2k
views
Comment: C: CWL in toil
6.5 years ago by Michael R. Crusoe ★ 1.9k
0
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1
reply
2.3k
views
Comment: C: CWL: nameext not returning expected array
6.6 years ago by Michael R. Crusoe ★ 1.9k
1
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0
replies
2.3k
views
Comment: C: CWL: nameext not returning expected array
6.6 years ago by Michael R. Crusoe ★ 1.9k
0
votes
0
replies
2.3k
views
Comment: C: CWL: nameext not returning expected array
6.6 years ago by Michael R. Crusoe ★ 1.9k
221 results • Page 1 of 5
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