User: Mahantesh Biradar

Reputation:
30
Status:
New User
Location:
Taipei, Taiwan
Website:
https://www.mahanteshb...
Twitter:
Mahantesh19_
Last seen:
1 year, 3 months ago
Joined:
4 years, 8 months ago
Email:
m******************@gmail.com

I'm a Graduate PhD researcher in Biomedical Science (Public Health | Epidemiology| Bioinformatics) & passionate for Social Media Strategy | Biz Dev

Posts by Mahantesh Biradar

<prev • 15 results • page 1 of 2 • next >
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Help needed for Interaction analysis (linear regression)
... Apologize me if its a silly query Hi friends I'm trying to generate a risk score (weighted by the beta of each SNP) using a set of 28 SNPs and my model looks like this --adjust --bfile project --covar pheno_file --covar-name Gender, Age,PC1,PC2,PC3 --linear --out file --pheno pheno_file --pheno- ...
interaction plink regression written 17 months ago by Mahantesh Biradar30
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Error: Failed to open [Covariate File]
... Hi Everyone! I'm doing a GWAS analysis for SNP. I'm using plink --file mydata --covar c.txt --covar-name AGE,BMI-SMOKE,ALC. But I'm getting this error: Failed to open [Covariate.txt]. Any suggestions? I have checked the file name and its spelled correctly! ...
gwas covariate plink snp file written 2.9 years ago by Mahantesh Biradar30
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How to handle pleiotropic effect in Mendelian randomization study?
... How to handle pleiotropic effect in Mendelian randomization study? I'm using the SNP/Genetic Score as an instrumental variable. I'm wondering what are the potential ways to correct for pleiotropic effect ...
randomization pleiotropic mendelian snp written 3.2 years ago by Mahantesh Biradar30
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How to convert genotypes values to numerical?
... I have genotype values like AA GG CC etc - How can I convert these values into 0, 1, 2? I'm using SAS to process my data. ...
numeric genotype snp written 3.3 years ago by Mahantesh Biradar30 • updated 3.3 years ago by piet1.7k
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How to calculate the genetic risk score?
... I have a SNP data which looks like SNP A SNP B SNP C AA GG CC AC CG GC etc How can I calculate the Genetic risk score based on Minor/risk allele. I'm currently using SAS to process my data. ...
score genetic sas riskscore risk written 3.3 years ago by Mahantesh Biradar30
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How can I check the distribution of genotypes and alleles in two groups using SAS?
... How can I check the distribution of genotypes and alleles in two groups using SAS? ...
frequency allele genotype sas written 3.4 years ago by Mahantesh Biradar30
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Java error while installing Haploview
... I have the following error when I'm trying to install the Haploview. I also download and installed the Java Runtime and Java platform JDK. But I still have the same error. Kindly let me know how to resolve this? Error: The install4j wizard could not find a JAVA RUNTIME Enviornment on your system. P ...
installation java error haploview written 3.5 years ago by Mahantesh Biradar30 • updated 3.2 years ago by Biostar ♦♦ 20
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How can I get a list of all SNPs from a gene of my interest?
... I would like to download the list all SNPs for a gene of my interest with all their details like Chromosome, Physical position etc. How can I do this? ...
gene ncbi hapmap snp written 3.6 years ago by Mahantesh Biradar30 • updated 3.6 years ago by Ibrahim Tanyalcin980
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How to filter the specific SNPs from whole genome data (SAS datasets)?
... I have a whole genome SNP data for few hundred patients stored in SAS datasets and I would like to know, How I can filter certain specific SNPs using the rs ids? The genotyping was performed on Axiom Genomewide array. I have PIDs as observations and S1, S2.... in the columns! ...
whole genome snp data snp written 3.6 years ago by Mahantesh Biradar30
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(Closed) How to find the duration between the dates in longitudinal data?
...  Data type: Longitudinal Observations: Multiple observations for one patient id (for repeated hospital visit)  Each observation has START and END date of treatment  Que: How to find the DURATION of the treatment for each patient based on multiple observations using SATRT and END date of the treatmen ...
duration longitudinal data dates sas written 4.0 years ago by Mahantesh Biradar30

Latest awards to Mahantesh Biradar

Popular Question 2.8 years ago, created a question with more than 1,000 views. For CNV data analysis using PLINK
Popular Question 2.8 years ago, created a question with more than 1,000 views. For How to calculate the genetic risk score?
Popular Question 2.8 years ago, created a question with more than 1,000 views. For How to convert .txt file to .MAP file for CNV data analysis using PLINK?
Popular Question 3.5 years ago, created a question with more than 1,000 views. For How to convert .txt file to .MAP file for CNV data analysis using PLINK?
Autobiographer 3.6 years ago, has more than 80 characters in the information field of the user's profile.

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