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2
votes
0
replies
3.3k
views
Comment:
C: for low coverage RNAseq how many reads assigned is the bare minimum for differen
6.6 years ago by
i.sudbery
22k
2
votes
1
reply
5.2k
views
Answer:
A: Clusters moving for same dataset and code using tSNE
6.6 years ago by
i.sudbery
22k
0
votes
0
replies
2.4k
views
Comment:
C: BSc Thesis "Machine learning application in diagnosis of a genetic diseases" - I
6.6 years ago by
i.sudbery
22k
4
votes
1
reply
2.4k
views
Comment:
C: BSc Thesis "Machine learning application in diagnosis of a genetic diseases" - I
6.6 years ago by
i.sudbery
22k
1
vote
1
reply
1.9k
views
Comment:
C: Selecting methods for performing pairwise RNAseq analysis without replicates
6.6 years ago by
i.sudbery
22k
1
vote
1
reply
1.9k
views
Comment:
C: Selecting methods for performing pairwise RNAseq analysis without replicates
6.6 years ago by
i.sudbery
22k
0
votes
0
replies
1.9k
views
Comment:
C: Selecting methods for performing pairwise RNAseq analysis without replicates
6.6 years ago by
i.sudbery
22k
1
vote
2
replies
1.9k
views
Answer:
A: Selecting methods for performing pairwise RNAseq analysis without replicates
6.6 years ago by
i.sudbery
22k
0
votes
0
replies
5.5k
views
Comment:
C: edgeR make contrast
6.6 years ago by
i.sudbery
22k
2
votes
1
reply
5.5k
views
Answer:
A: edgeR make contrast
6.6 years ago by
i.sudbery
22k
0
votes
1
reply
5.5k
views
Comment:
C: edgeR make contrast
6.6 years ago by
i.sudbery
22k
3
votes
1
reply
5.5k
views
Comment:
C: edgeR make contrast
6.6 years ago by
i.sudbery
22k
0
votes
0
replies
2.0k
views
Answer:
A: Calculate average parental genotype
6.7 years ago by
i.sudbery
22k
1
vote
1
reply
6.0k
views
Comment:
C: Software to extract run information from FASTQ headers?
6.7 years ago by
i.sudbery
22k
1
vote
1
reply
1.7k
views
Answer:
A: Highly uneven RINs, mapping rates, and methods to deal with this (normalisation,
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.5k
views
Answer:
A: ChIP-Seq density plot of the TSS regions?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
1.7k
views
Comment:
C: Highly uneven RINs, mapping rates, and methods to deal with this
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.1k
views
Answer:
A: Dataset of proteins and their interactions
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
5.4k
views
Comment:
C: Extract read with high GC content from a bam file
6.7 years ago by
i.sudbery
22k
5
votes
1
reply
5.4k
views
Answer:
A: Extract read with high GC content from a bam file
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
1.3k
views
Comment:
C: Problem training Augustus (prediction genes)
6.7 years ago by
i.sudbery
22k
1
vote
0
replies
1.6k
views
Answer:
A: simulate DNA reads with unique molecular identifiers (UMIs)
6.7 years ago by
i.sudbery
22k
1
vote
0
replies
2.1k
views
Comment:
C: Negative dataset selection
6.7 years ago by
i.sudbery
22k
2
votes
0
replies
5.1k
views
Comment:
C: Limma can make differential expression with just one case in one group?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
6.0k
views
Comment:
C: Extract read sequence from BAM files depending on the alignment coordinates
6.7 years ago by
i.sudbery
22k
3
votes
1
reply
2.5k
views
Answer:
A: RNAseq differential expression analysis : learning design matrix
6.7 years ago by
i.sudbery
22k
1
vote
0
replies
5.1k
views
Comment:
C: How to answer if the biological process is up or down-regulated?
6.7 years ago by
i.sudbery
22k
1
vote
0
replies
5.1k
views
Comment:
C: How to answer if the biological process is up or down-regulated?
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
1.7k
views
Comment:
C: Finding UP and DOWN regulated genes in a pathway incline to which group
6.7 years ago by
i.sudbery
22k
7
votes
1
reply
5.1k
views
Answer:
A: How to answer if the biological process is up or down-regulated?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
4.0k
views
Comment:
C: Matched Normal Tissue Sample of RNAseq data from TCGA
6.7 years ago by
i.sudbery
22k
1
vote
1
reply
1.8k
views
Comment:
C: How to call this file format?
6.7 years ago by
i.sudbery
22k
1
vote
1
reply
5.6k
views
Comment:
C: Filtering sam/bam by using CIGAR deletion sites
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
5.6k
views
Comment:
C: Filtering sam/bam by using CIGAR deletion sites
6.7 years ago by
i.sudbery
22k
1
vote
1
reply
2.5k
views
Answer:
C: 1000 genomes coding SNPs not in exonic regions?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
2.5k
views
Comment:
C: 1000 genomes coding SNPs not in exonic regions?
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.5k
views
Answer:
A: Single cell rna-seq (cel-seq 2) read position shift?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
3.4k
views
Comment:
C: How to deduplicate UMI with mapping shift ?
6.7 years ago by
i.sudbery
22k
2
votes
0
replies
4.6k
views
Answer:
A: is there any statistical way to analysis two groups without replications?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
4.6k
views
Comment:
C: is there any statistical way to analysis two groups without replications?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
4.6k
views
Comment:
C: is there any statistical way to analysis two groups without replications?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
1.8k
views
Comment:
C: Upgrade to 3.18 no longer allows optional parameters to be omitted
6.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.1k
views
Comment:
C: Classification using publicly available RNA-seq dataset
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
3.4k
views
Comment:
C: How to deduplicate UMI with mapping shift ?
6.7 years ago by
i.sudbery
22k
1
vote
1
reply
2.1k
views
Answer:
A: Classification using publicly available RNA-seq dataset
6.7 years ago by
i.sudbery
22k
1
vote
2
replies
3.4k
views
Answer:
A: How to deduplicate UMI with mapping shift ?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
17k
views
Comment:
C: De-duplicate UMI at FASTQ level
6.7 years ago by
i.sudbery
22k
1
vote
0
replies
3.1k
views
Answer:
A: Design matrix for voom: with or without batch blocking?
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
17k
views
Comment:
C: De-duplicate UMI at FASTQ level
6.7 years ago by
i.sudbery
22k
0
votes
1
reply
17k
views
Comment:
C: De-duplicate UMI at FASTQ level
6.7 years ago by
i.sudbery
22k
1,719 results • Page
29 of 35
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