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comments
1
vote
0
replies
7.7k
views
Answer:
A: Does allele refer to the entire gene sequence or one position of the gene sequen
8.4 years ago by
i.sudbery
22k
3
votes
2
replies
2.9k
views
Answer:
A: Existing software to calculate RNASeq read distribution by "gene_type" (Gencode)
8.5 years ago by
i.sudbery
22k
1
vote
0
replies
2.9k
views
Answer:
A: Finding miRNA promoter in UCSC genome browser?
8.5 years ago by
i.sudbery
22k
2
votes
1
reply
5.2k
views
Answer:
A: TCGA genotype data
8.6 years ago by
i.sudbery
22k
0
votes
0
replies
2.1k
views
Comment:
C: Normalisation of arrays with global changes expected
8.6 years ago by
i.sudbery
22k
1
vote
0
replies
2.5k
views
Answer:
A: Error: duplicate GFF ID 'ENST00000400518' encountered! [FAILED] Error: c
8.6 years ago by
i.sudbery
22k
0
votes
0
replies
3.2k
views
Comment:
C: Opinion: Bioinformatician - What comes first? Biology vs Informatics.
8.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.1k
views
Comment:
C: Normalisation of arrays with global changes expected
8.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.1k
views
Comment:
C: Normalisation of arrays with global changes expected
8.7 years ago by
i.sudbery
22k
1
vote
5
replies
2.1k
views
Normalisation of arrays with global changes expected
microarray
normalisation
limma
updated 8.7 years ago by
patrick.bradley
▴ 30 • written 8.7 years ago by
i.sudbery
22k
0
votes
0
replies
4.9k
views
Comment:
C: The right pipline with cufflinks, cuffmerge and cuffdiff
8.7 years ago by
i.sudbery
22k
0
votes
1
reply
4.0k
views
Comment:
C: settings optional parameters bwa mem
8.7 years ago by
i.sudbery
22k
2
votes
1
reply
4.9k
views
Comment:
C: The right pipline with cufflinks, cuffmerge and cuffdiff
8.7 years ago by
i.sudbery
22k
2
votes
0
replies
2.0k
views
Answer:
A: Gene list overlap - Null distribution
8.7 years ago by
i.sudbery
22k
0
votes
0
replies
3.4k
views
Comment:
C: Publicly available RNA-seq data of neurons from human
8.7 years ago by
i.sudbery
22k
0
votes
0
replies
4.3k
views
Comment:
C: mapping read is low for miRNA data after trimming
8.7 years ago by
i.sudbery
22k
1
vote
0
replies
17k
views
Comment:
C: HISAT2 or Tophat2
8.7 years ago by
i.sudbery
22k
0
votes
1
reply
4.3k
views
Comment:
C: mapping read is low for miRNA data after trimming
8.7 years ago by
i.sudbery
22k
2
votes
0
replies
8.1k
views
Comment:
C: error in bowtie2 alignment
8.7 years ago by
i.sudbery
22k
0
votes
0
replies
2.6k
views
Comment:
C: Remote blast from biopython
8.7 years ago by
i.sudbery
22k
1
vote
2
replies
9.0k
views
Comment:
C: RNA-Seq raw fastq files from TCGA
8.7 years ago by
i.sudbery
22k
2
votes
1
reply
2.5k
views
Comment:
C: Generate more splice variant from RNA-seq data
8.7 years ago by
i.sudbery
22k
5
votes
1
reply
2.5k
views
Answer:
A: Generate more splice variant from RNA-seq data
8.7 years ago by
i.sudbery
22k
1
vote
2
replies
2.6k
views
Remote blast from biopython
biopython
blast
updated 8.7 years ago by
Biostar
20 • written 8.8 years ago by
i.sudbery
22k
6
votes
0
replies
6.2k
views
Answer:
C: RPKM and FPKM directly comparable?
8.8 years ago by
i.sudbery
22k
2
votes
1
reply
4.0k
views
Answer:
A: p value determination of normalized values
8.8 years ago by
i.sudbery
22k
5
votes
1
reply
13k
views
Answer:
A: Is going back to the wet lab worth it?
8.8 years ago by
i.sudbery
22k
0
votes
0
replies
2.9k
views
Answer:
A: Most commonly used biClustering algorithm?
8.8 years ago by
i.sudbery
22k
0
votes
1
reply
2.5k
views
Comment:
C: Cross platform normalization for miRNA data
8.8 years ago by
i.sudbery
22k
0
votes
1
reply
2.5k
views
Comment:
C: Cross platform normalization for miRNA data
8.8 years ago by
i.sudbery
22k
0
votes
0
replies
8.7k
views
Answer:
A: P Value Or Statistical Significance Of Real Peak Compared To Random Peak Overlap
8.9 years ago by
i.sudbery
22k
1
vote
0
replies
2.9k
views
Comment:
C: Identification of APAs (alternative polyadenylation) from standard RNA-seq
8.9 years ago by
i.sudbery
22k
2
votes
1
reply
2.9k
views
Answer:
A: Identification of APAs (alternative polyadenylation) from standard RNA-seq
8.9 years ago by
i.sudbery
22k
2
votes
1
reply
3.1k
views
Answer:
A: How do you people tell if a gene is really present in the sample after mapping t
8.9 years ago by
i.sudbery
22k
2
votes
0
replies
2.3k
views
Answer:
A: For eCLIP-seq and iCLIP-seq, should I use the left or center position of the pea
8.9 years ago by
i.sudbery
22k
0
votes
1
reply
2.8k
views
Comment:
C: PE reads uneven after cutadapt
8.9 years ago by
i.sudbery
22k
0
votes
1
reply
2.8k
views
Comment:
C: PE reads uneven after cutadapt
8.9 years ago by
i.sudbery
22k
1
vote
1
reply
1.8k
views
Answer:
A: Intron within the mRNA stranded-specific library
8.9 years ago by
i.sudbery
22k
0
votes
0
replies
2.5k
views
Comment:
C: RNA-seq subsampling for Monte Carlo simulation to test data?
8.9 years ago by
i.sudbery
22k
0
votes
0
replies
13k
views
Comment:
C: How to properly combine two bam files of a paired-end data
8.9 years ago by
i.sudbery
22k
1
vote
0
replies
1.6k
views
Comment:
C: Shortest way between Protein and Pathway?
8.9 years ago by
i.sudbery
22k
0
votes
0
replies
13k
views
Comment:
C: How to properly combine two bam files of a paired-end data
8.9 years ago by
i.sudbery
22k
0
votes
1
reply
13k
views
Comment:
C: How to properly combine two bam files of a paired-end data
8.9 years ago by
i.sudbery
22k
1
vote
1
reply
13k
views
Comment:
C: How to properly combine two bam files of a paired-end data
8.9 years ago by
i.sudbery
22k
1
vote
1
reply
13k
views
Answer:
A: How to properly combine two bam files of a paired-end data
8.9 years ago by
i.sudbery
22k
0
votes
0
replies
2.5k
views
Comment:
C: Ensembl ID conversion for a specific build
9.0 years ago by
i.sudbery
22k
0
votes
0
replies
1.9k
views
Answer:
A: problem determining read directions
9.0 years ago by
i.sudbery
22k
0
votes
0
replies
2.5k
views
Answer:
A: Ensemble ID conversion for a specific build
9.0 years ago by
i.sudbery
22k
0
votes
0
replies
7.2k
views
Comment:
C: What does Ensembl/Genecode gene_type "processed_gene" really mean?
9.0 years ago by
i.sudbery
22k
1
vote
1
reply
7.2k
views
Answer:
A: What does Ensembl/Genecode gene_type "processed_gene" really mean?
9.0 years ago by
i.sudbery
22k
1,719 results • Page
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