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Comment: Comment: log2 fold change in RNA-seq analysis
12 hours ago by i.sudbery 19k
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793
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
12 hours ago by i.sudbery 19k
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1
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793
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
13 hours ago by i.sudbery 19k
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0
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195
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Answer: Answer: How do we do quantification using stringtie merge option for all the merged samp
15 hours ago by i.sudbery 19k
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129
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Answer: Answer: How to interpret this plotMDS of three disease clusters?
16 hours ago by i.sudbery 19k
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793
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
16 hours ago by i.sudbery 19k
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191
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Comment: Comment: Problem with Calling Variants from RNA-Seq data
8 days ago by i.sudbery 19k
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233
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Answer: Answer: Biomart issue, why so few 3'utrs?
9 days ago by i.sudbery 19k
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233
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Comment: Comment: Biomart issue, why so few 3'utrs?
9 days ago by i.sudbery 19k
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473
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
13 days ago by i.sudbery 19k
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1
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473
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
13 days ago by i.sudbery 19k
0
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0
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528
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Comment: Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
14 days ago by i.sudbery 19k
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1
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473
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 days ago by i.sudbery 19k
1
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1
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473
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 days ago by i.sudbery 19k
0
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1
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473
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 days ago by i.sudbery 19k
1
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1
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429
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Answer: Answer: Understanding STAR output (Aligned.out.sam file)
16 days ago by i.sudbery 19k
1
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1
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453
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Comment: Comment: How does gene length effect the number of reads mapped
20 days ago by i.sudbery 19k
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2
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453
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Comment: Comment: How does gene length effect the number of reads mapped
20 days ago by i.sudbery 19k
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1
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453
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Answer: Answer: How goes gene length effect the number of reads mapped
21 days ago by i.sudbery 19k
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0
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471
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Answer: Answer: What purposes can TPM values be used for?
21 days ago by i.sudbery 19k
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215
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Comment: Comment: Alternatives to metanalyisis. P integration. Horiztonal integration RNA-seq
22 days ago by i.sudbery 19k
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2.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
23 days ago by i.sudbery 19k
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0
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668
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Comment: Comment: Low mapping rate with Salmon
23 days ago by i.sudbery 19k
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1
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2.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
24 days ago by i.sudbery 19k
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0
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360
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Comment: Comment: ChIP-seq datasets: input samples omitted?
24 days ago by i.sudbery 19k
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0
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177
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix)?
24 days ago by i.sudbery 19k
1
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1
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2.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
24 days ago by i.sudbery 19k
1
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0
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2.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
24 days ago by i.sudbery 19k
0
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1
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668
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Comment: Comment: Low mapping rate with Salmon
27 days ago by i.sudbery 19k
1
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0
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391
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Comment: Comment: what is the purpose of indexing the reference genome (Kallisto)
27 days ago by i.sudbery 19k
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0
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793
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
4 weeks ago by i.sudbery 19k
0
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1
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668
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Comment: Comment: Low mapping rate with Salmon
4 weeks ago by i.sudbery 19k
1
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0
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569
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Comment: Comment: Marking duplicates using UMIs
4 weeks ago by i.sudbery 19k
1
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1
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569
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Comment: Comment: Marking duplicates using UMIs
4 weeks ago by i.sudbery 19k
2
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0
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281
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Answer: Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
5 weeks ago by i.sudbery 19k
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1
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1.3k
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Comment: Comment: How I know if it is a batch effect or are real differences between my controls a
6 weeks ago by i.sudbery 19k
6
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1
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1.3k
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Answer: Answer: ¿How I know if it is a batch effect or are real differences between my controls
6 weeks ago by i.sudbery 19k
1
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1
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487
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Comment: Comment: chromHMM annotations
6 weeks ago by i.sudbery 19k
1
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1
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487
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Answer: Answer: chromHMM annotations
6 weeks ago by i.sudbery 19k
0
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1
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477
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Comment: Comment: DESeq: too low p-value for RNAseq
7 weeks ago by i.sudbery 19k
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0
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417
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Comment: Comment: Mathematical/Statistical models to predict mRNA half-life
9 weeks ago by i.sudbery 19k
0
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1
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519
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Answer: Answer: UMI_extract for paired end reads of micro_RNA
10 weeks ago by i.sudbery 19k
1
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0
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226
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Answer: Answer: Detecting presence of UMI from BAM/fastq files without prior knowledge
10 weeks ago by i.sudbery 19k
0
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1
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626
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Answer: Answer: conda install -Killed
10 weeks ago by i.sudbery 19k
1
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0
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407
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Answer: Answer: Is it feasible to merge Illumina RNA-Seq data with varying read lengths?
10 weeks ago by i.sudbery 19k
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0
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232
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Comment: Comment: RNA-seq DE with AAV injection
10 weeks ago by i.sudbery 19k
1
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1
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768
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Comment: Comment: Difference between GLM and Wilcoxon rank sum test
11 weeks ago by i.sudbery 19k
3
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1
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768
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Answer: Answer: Difference between GLM and Wilcoxon rank sum test
11 weeks ago by i.sudbery 19k
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0
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625
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Comment: Comment: minimap2 gets killed, but it doesn't explain why
11 weeks ago by i.sudbery 19k
2
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1
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295
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Answer: Answer: Error from cgat gtf2gtf --method=genes-to-unique-chunks
12 weeks ago by i.sudbery 19k
1,513 results • Page 1 of 31
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