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8
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2
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15k
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Answer: A: Questions about DAVID
updated 4.4 years ago by 43k • written 8.3 years ago by ▴ 690
4
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2
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5.0k
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Answer: C: DESeq2: Is dispersion estimation gene-wise or gene- and condition-wise?
updated 4.4 years ago by 43k • written 8.3 years ago by ▴ 690
1
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1
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2.1k
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Answer: Answer: Method to identify novel transcript based on strand-specific RNAseq
updated 21 months ago by 43k • written 8.3 years ago by ▴ 690
0
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1
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1.8k
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Answer: A: Cuffcompare or Cuffmerge for tissue specificity?
updated 4.4 years ago by 43k • written 8.5 years ago by ▴ 690
1
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0
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3.3k
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Answer: A: Single-cell RNA-seq : for what questions ? and what are the classical pipelines
updated 4.4 years ago by 43k • written 8.5 years ago by ▴ 690
5
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0
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13k
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Answer: A: Batch effect in DESeq2 - multiple factor or SVA?
updated 4.5 years ago by 43k • written 8.7 years ago by ▴ 690
2
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0
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13k
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Answer: A: Batch effect in DESeq2 - multiple factor or SVA?
updated 4.5 years ago by 43k • written 8.7 years ago by ▴ 690
0
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0
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2.1k
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Answer: A: hicAggregateContacts use with different HiC matrix format
5.4 years ago by vivekbhr ▴ 690
3
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1
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10k
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Answer: A: RNA-seq HEK293T recent datasets
6.7 years ago by vivekbhr ▴ 690
0
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1
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2.4k
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Answer: A: R reads q-score
7.1 years ago by vivekbhr ▴ 690
0
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0
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1.6k
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Answer: A: The best way to correlate some genome wide signal to histone modification signal
7.2 years ago by vivekbhr ▴ 690
1
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2
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8.6k
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Answer: A: How do I find unmapped reads in my sam file?
7.6 years ago by vivekbhr ▴ 690
0
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1
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8.6k
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Answer: A: Extracting ids of a cluster in heatmap
7.6 years ago by vivekbhr ▴ 690
1
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0
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11k
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Answer: C: DESeq2 design and interaction terms
7.6 years ago by vivekbhr ▴ 690
13
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0
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74k
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Answer: A: Subsetting in R based on row name?
8.0 years ago by vivekbhr ▴ 690
1
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0
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5.5k
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Answer: A: Annotate peaks based on Histone Mark
8.0 years ago by vivekbhr ▴ 690
0
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2
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5.4k
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Answer: A: Bioconductor as a source for the dependencies of an R package?
8.1 years ago by vivekbhr ▴ 690
2
votes
1
reply
2.3k
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Answer: Answer: How to determine quantitative differences of histone enrichment in enhancer regi
updated 21 months ago by 43k • written 8.2 years ago by ▴ 690
1
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0
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4.2k
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Answer: A: How to generate a pie chart of genomic annotations of ChIP peaks
8.3 years ago by vivekbhr ▴ 690
0
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0
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2.6k
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Answer: A: Tophat 2 alignment error
8.3 years ago by vivekbhr ▴ 690
0
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0
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2.2k
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Answer: A: Issue with barplot ggplot2
8.4 years ago by vivekbhr ▴ 690
3
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1
reply
4.3k
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Answer: Answer: Microarray Time series data analysis through limma ?
updated 19 months ago by 43k • written 8.6 years ago by ▴ 690
2
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0
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6.2k
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Answer: Answer: R: Difference between heatmap, heatmap.plus and heatmap.2
updated 19 months ago by 43k • written 8.7 years ago by ▴ 690
0
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2
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3.7k
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Answer: A: How to add Log2FoldChange as an argument for plotMA in DESeq2
8.7 years ago by vivekbhr ▴ 690
2
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0
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1.7k
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Answer: A: Microarray data analysis
8.7 years ago by vivekbhr ▴ 690
0
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0
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8.0k
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Answer: A: How to remove non-unique mapping reads with Hisat?
8.8 years ago by vivekbhr ▴ 690
1
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1
reply
2.2k
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Answer: Answer: question about NIH Epigenome roadmap neural differentiation data
updated 15 months ago by 43k • written 8.9 years ago by ▴ 690
5
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1
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6.2k
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Answer: Answer: Which tool can plot the enrichment of specified motif across ChIP-seq bed files?
updated 14 months ago by 43k • written 9.0 years ago by ▴ 690
1
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0
replies
4.0k
views
Answer: Answer: Differential binding analysis
updated 2.3 years ago by 43k • written 9.0 years ago by ▴ 690
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