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Comment:
Comment: BWA-mem not working with Snakemake + singularity
21 months ago by
brunobsouzaa
▴ 840
1
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1
reply
636
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Answer:
Answer: Can't view the last rows
22 months ago by
brunobsouzaa
▴ 840
0
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1
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1.5k
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Comment:
Comment: BWA-mem not working with Snakemake + singularity
22 months ago by
brunobsouzaa
▴ 840
1
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5
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1.5k
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BWA-mem not working with Snakemake + singularity
snakemake
bwa
singularity
21 months ago by
brunobsouzaa
▴ 840
0
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0
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1.1k
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Comment:
Comment: How to use a variable to install an R package
22 months ago by
brunobsouzaa
▴ 840
0
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0
replies
784
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Comment:
Comment: Bioinformatics analysis from raw data to disease driver variants
2.1 years ago by
brunobsouzaa
▴ 840
0
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0
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2.3k
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Comment:
Comment: Germline variant calling pipeline using Snakemake
2.2 years ago by
brunobsouzaa
▴ 840
3
votes
1
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1.4k
views
Comment:
Comment: How DESeq2 formula correction works?
2.3 years ago by
brunobsouzaa
▴ 840
1
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0
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1.6k
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Comment:
Comment: Is there a way to convert a .vcf.gz.tbi file back to a .vcf.gz or .vcf file?
2.3 years ago by
brunobsouzaa
▴ 840
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0
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1.7k
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Comment:
Comment: GATK's selectVariants not outputting VCF
2.3 years ago by
brunobsouzaa
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0
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1.7k
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Comment:
Comment: GATK's selectVariants not outputting VCF
2.3 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
888
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Comment:
Comment: Illumina base space
2.4 years ago by
brunobsouzaa
▴ 840
1
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1
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2.1k
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Comment:
Comment: Count regions that overlap with python
2.4 years ago by
brunobsouzaa
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0
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1.7k
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Comment:
Comment: Biopython Code to Convert DNA FASTA file to Protein FASTA file
2.4 years ago by
brunobsouzaa
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1
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1.3k
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Comment:
Comment: VEP synonyms file
2.4 years ago by
brunobsouzaa
▴ 840
1
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0
replies
1.1k
views
Comment:
Comment: add VAF to VCF
2.4 years ago by
brunobsouzaa
▴ 840
1
vote
1
reply
1.0k
views
Comment:
Comment: PLINK CASE-CONTROL ANALYSIS
2.4 years ago by
brunobsouzaa
▴ 840
0
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0
replies
518
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Comment:
Comment: How can I transform a three column data frame into a binary-table in R?
2.4 years ago by
brunobsouzaa
▴ 840
0
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0
replies
868
views
Comment:
Comment: Deleting all the rows from ANY column that contain a key word
2.5 years ago by
brunobsouzaa
▴ 840
0
votes
1
reply
712
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Comment:
Comment: The minor allele frequency
2.6 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
964
views
Comment:
Comment: miRNAs pathway analysis
2.6 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
1.4k
views
Comment:
Comment: Detect Structural varirant from VCF file
2.6 years ago by
brunobsouzaa
▴ 840
0
votes
1
reply
855
views
Comment:
Comment: Statistical methods to determine descrimimant variables between two groups
2.6 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
735
views
Comment:
Comment: gatk requests enormous amounts of memory. How to limit it?
2.6 years ago by
brunobsouzaa
▴ 840
0
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0
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1.6k
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Comment:
Comment: Hard filtering on GATK HaplotypeCaller giving multiple warnings
2.6 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
1.0k
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Comment:
Comment: remove vcf variants from bam
2.7 years ago by
brunobsouzaa
▴ 840
0
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1
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1.2k
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Comment:
Comment: for loop with basename created one merged sam file instead of multiple separate
2.7 years ago by
brunobsouzaa
▴ 840
1
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0
replies
684
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Comment:
Comment: Filter track list and variant list
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
1
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1.3k
views
Comment:
Comment: STAR aligment generating genome index
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
535
views
Comment:
Comment: RNA-seq alignment in 2 pass mode
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
1
reply
748
views
Comment:
Comment: edgeR, how to write the model matrix for comparison?
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
630
views
Comment:
Comment: Sanger sequencing
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
693
views
Comment:
Comment: How to detect CNV via readDepth with multiple samples
2.8 years ago by
brunobsouzaa
▴ 840
1
vote
1
reply
2.7k
views
Comment:
Comment: How to split text into columns using R
2.8 years ago by
brunobsouzaa
▴ 840
1
vote
1
reply
1.2k
views
Comment:
Comment: Merging .bam files in STAR
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
845
views
Comment:
Comment: Vep combined or single
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
1
reply
845
views
Comment:
Comment: Vep combined or single
2.8 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
1.6k
views
Comment:
Comment: Snakemake issue
2.9 years ago by
brunobsouzaa
▴ 840
5
votes
5
replies
1.6k
views
Snakemake issue
Snakemake
python
updated 2.9 years ago by
Wayne
★ 2.1k • written 2.9 years ago by
brunobsouzaa
▴ 840
0
votes
1
reply
1.1k
views
Comment:
Comment: Adding flanking regions to a gene for primer design
2.9 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
1.1k
views
Comment:
Comment: CNV kit merge all my gene names together
3.0 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
3.1k
views
Comment:
Comment: How to extract specific field from VCF?
3.0 years ago by
brunobsouzaa
▴ 840
1
vote
2
replies
3.1k
views
Answer:
Answer: How to extract specific field from VCF?
3.0 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
757
views
Comment:
Comment: ANNOVAR
3.0 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
859
views
Comment:
Comment: Looking for a Bioinformatics Certification course
3.0 years ago by
brunobsouzaa
▴ 840
2
votes
0
replies
938
views
Answer:
Answer: Error in Heat map
3.0 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
1.1k
views
Comment:
Comment: RNA seq
3.1 years ago by
brunobsouzaa
▴ 840
1
vote
2
replies
1.1k
views
Comment:
Comment: RNA seq
updated 3.1 years ago by
rpolicastro
13k • written 3.1 years ago by
brunobsouzaa
▴ 840
0
votes
1
reply
1.4k
views
Comment:
Comment: ApplyBQSR won't recognise output argument
3.1 years ago by
brunobsouzaa
▴ 840
0
votes
0
replies
1.6k
views
Comment:
Comment: Calculatio median in a Fastq file using bioawk/awk
3.1 years ago by
brunobsouzaa
▴ 840
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