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Comment:
Comment: BWA-mem not working with Snakemake + singularity
12 months ago by
brunobsouzaa
▴ 830
1
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1
reply
499
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Answer:
Answer: Can't view the last rows
13 months ago by
brunobsouzaa
▴ 830
0
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1
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1.1k
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Comment:
Comment: BWA-mem not working with Snakemake + singularity
13 months ago by
brunobsouzaa
▴ 830
1
vote
5
replies
1.1k
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BWA-mem not working with Snakemake + singularity
snakemake
bwa
singularity
12 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
851
views
Comment:
Comment: How to use a variable to install an R package
14 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
579
views
Comment:
Comment: Bioinformatics analysis from raw data to disease driver variants
17 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
2.1k
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Comment:
Comment: Germline variant calling pipeline using Snakemake
17 months ago by
brunobsouzaa
▴ 830
3
votes
1
reply
1.1k
views
Comment:
Comment: How DESeq2 formula correction works?
19 months ago by
brunobsouzaa
▴ 830
1
vote
0
replies
1.2k
views
Comment:
Comment: Is there a way to convert a .vcf.gz.tbi file back to a .vcf.gz or .vcf file?
19 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.3k
views
Comment:
Comment: GATK's selectVariants not outputting VCF
19 months ago by
brunobsouzaa
▴ 830
0
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0
replies
1.3k
views
Comment:
Comment: GATK's selectVariants not outputting VCF
19 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
726
views
Comment:
Comment: Illumina base space
20 months ago by
brunobsouzaa
▴ 830
1
vote
1
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1.6k
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Comment:
Comment: Count regions that overlap with python
20 months ago by
brunobsouzaa
▴ 830
0
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0
replies
1.2k
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Comment:
Comment: Biopython Code to Convert DNA FASTA file to Protein FASTA file
20 months ago by
brunobsouzaa
▴ 830
0
votes
1
reply
981
views
Comment:
Comment: VEP synonyms file
20 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
808
views
Comment:
Comment: add VAF to VCF
20 months ago by
brunobsouzaa
▴ 830
1
vote
1
reply
760
views
Comment:
Comment: PLINK CASE-CONTROL ANALYSIS
21 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
401
views
Comment:
Comment: How can I transform a three column data frame into a binary-table in R?
21 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
673
views
Comment:
Comment: Deleting all the rows from ANY column that contain a key word
21 months ago by
brunobsouzaa
▴ 830
0
votes
1
reply
547
views
Comment:
Comment: The minor allele frequency
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
674
views
Comment:
Comment: miRNAs pathway analysis
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.0k
views
Comment:
Comment: Detect Structural varirant from VCF file
22 months ago by
brunobsouzaa
▴ 830
0
votes
1
reply
652
views
Comment:
Comment: Statistical methods to determine descrimimant variables between two groups
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
576
views
Comment:
Comment: gatk requests enormous amounts of memory. How to limit it?
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.3k
views
Comment:
Comment: Hard filtering on GATK HaplotypeCaller giving multiple warnings
23 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
802
views
Comment:
Comment: remove vcf variants from bam
24 months ago by
brunobsouzaa
▴ 830
0
votes
1
reply
889
views
Comment:
Comment: for loop with basename created one merged sam file instead of multiple separate
24 months ago by
brunobsouzaa
▴ 830
1
vote
0
replies
524
views
Comment:
Comment: Filter track list and variant list
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
829
views
Comment:
Comment: STAR aligment generating genome index
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
436
views
Comment:
Comment: RNA-seq alignment in 2 pass mode
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
597
views
Comment:
Comment: edgeR, how to write the model matrix for comparison?
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
497
views
Comment:
Comment: Sanger sequencing
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
559
views
Comment:
Comment: How to detect CNV via readDepth with multiple samples
2.1 years ago by
brunobsouzaa
▴ 830
1
vote
1
reply
2.2k
views
Comment:
Comment: How to split text into columns using R
2.1 years ago by
brunobsouzaa
▴ 830
1
vote
1
reply
923
views
Comment:
Comment: Merging .bam files in STAR
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
667
views
Comment:
Comment: Vep combined or single
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
667
views
Comment:
Comment: Vep combined or single
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.4k
views
Comment:
Comment: Snakemake issue
2.2 years ago by
brunobsouzaa
▴ 830
5
votes
5
replies
1.4k
views
Snakemake issue
Snakemake
python
updated 2.2 years ago by
Wayne
★ 1.9k • written 2.2 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
774
views
Comment:
Comment: Adding flanking regions to a gene for primer design
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
883
views
Comment:
Comment: CNV kit merge all my gene names together
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
2.6k
views
Comment:
Comment: How to extract specific field from VCF?
2.3 years ago by
brunobsouzaa
▴ 830
1
vote
2
replies
2.6k
views
Answer:
Answer: How to extract specific field from VCF?
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
611
views
Comment:
Comment: ANNOVAR
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
722
views
Comment:
Comment: Looking for a Bioinformatics Certification course
2.3 years ago by
brunobsouzaa
▴ 830
2
votes
0
replies
735
views
Answer:
Answer: Error in Heat map
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
948
views
Comment:
Comment: RNA seq
2.4 years ago by
brunobsouzaa
▴ 830
1
vote
2
replies
948
views
Comment:
Comment: RNA seq
updated 2.4 years ago by
rpolicastro
13k • written 2.4 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
1.1k
views
Comment:
Comment: ApplyBQSR won't recognise output argument
2.4 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.4k
views
Comment:
Comment: Calculatio median in a Fastq file using bioawk/awk
2.4 years ago by
brunobsouzaa
▴ 830
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