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Comment:
C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by
igor
13k
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1
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11k
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Comment:
C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by
igor
13k
1
vote
1
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2.5k
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Comment:
C: TMM normalized TPM
3.2 years ago by
igor
13k
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756
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Comment:
C: Searching for Cell Type Database -- Similar to GeneCards
3.2 years ago by
igor
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1.1k
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Comment:
C: Cell type assignment for non-model organism single cell RNA-seq
3.2 years ago by
igor
13k
1
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1
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2.5k
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Comment:
C: TMM normalized TPM
3.2 years ago by
igor
13k
0
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1
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1.1k
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Comment:
C: Cell type assignment for non-model organism single cell RNA-seq
3.2 years ago by
igor
13k
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1.9k
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Comment:
C: Why full-length sequencing is not possible in UMI-based methods in single-cell R
3.2 years ago by
igor
13k
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3.9k
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Comment:
C: What programming language do you use the most in your work? Which one do you lik
3.2 years ago by
igor
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1.2k
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Comment:
C: Annotate PBMC scRNA-seq data
3.2 years ago by
igor
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5.9k
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Comment:
C: normalization in single cell RNAseq
3.3 years ago by
igor
13k
1
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1.5k
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Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
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1
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1.5k
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Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
0
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1
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1.5k
views
Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
0
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1
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1.5k
views
Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
1
vote
1
reply
1.5k
views
Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
0
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1
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1.5k
views
Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
1
vote
1
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1.5k
views
Comment:
C: Get list of gene signatures published
3.3 years ago by
igor
13k
0
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0
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3.7k
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Comment:
C: Algorithm to remove batch effects
3.3 years ago by
igor
13k
0
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1
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2.1k
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Comment:
C: CNVKit for unmatched tumor-only WGS samples
3.3 years ago by
igor
13k
0
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1
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2.1k
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Comment:
C: CNVKit for unmatched tumor-only WGS samples
3.3 years ago by
igor
13k
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5.7k
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Comment:
C: Slingshot: how do you choose which type of dimensionality reduction to use it wi
3.3 years ago by
igor
13k
1
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4.4k
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Comment:
C: 10x to cloupe
3.3 years ago by
igor
13k
0
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1
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2.0k
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Comment:
C: Large Count Discrepancy of Key Gene Between STAR and HISAT2
3.3 years ago by
igor
13k
1
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1
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2.0k
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Comment:
C: Large Count Discrepancy of Key Gene Between STAR and HISAT2
3.3 years ago by
igor
13k
1
vote
1
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2.0k
views
Comment:
C: Large Count Discrepancy of Key Gene Between STAR and HISAT2
3.3 years ago by
igor
13k
0
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0
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949
views
Comment:
C: quantile normalization for normalized values
3.4 years ago by
igor
13k
0
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0
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811
views
Comment:
C: Seurat merge differing number of rows
3.4 years ago by
igor
13k
0
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0
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1.5k
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Comment:
C: bcftools call variant calling model
3.4 years ago by
igor
13k
0
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0
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947
views
Comment:
C: Cell ratio between FACS and 10X
3.4 years ago by
igor
13k
0
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1
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947
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Comment:
C: Cell ratio between FACS and 10X
3.4 years ago by
igor
13k
0
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0
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4.0k
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Comment:
C: Integrating two Seurat Objects
3.4 years ago by
igor
13k
0
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0
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804
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Comment:
C: Pre-ranked GSEA on gene clusters
3.4 years ago by
igor
13k
0
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0
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3.4k
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Comment:
C: GSVA / ssGSEA on single cell RNA cluster
3.4 years ago by
igor
13k
0
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1
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3.4k
views
Comment:
C: GSVA / ssGSEA on single cell RNA cluster
3.4 years ago by
igor
13k
0
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0
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1.1k
views
Comment:
C: Mutect2 missing mutations
3.4 years ago by
igor
13k
0
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0
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919
views
Comment:
C: how to calculate TMB from call stats file
3.4 years ago by
igor
13k
0
votes
0
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2.1k
views
Comment:
C: Best practices to perform a gene set enrichment analysis (GSEA) with E. coli?
3.4 years ago by
igor
13k
0
votes
1
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2.1k
views
Comment:
C: Best practices to perform a gene set enrichment analysis (GSEA) with E. coli?
3.4 years ago by
igor
13k
0
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1
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2.1k
views
Comment:
C: Best practices to perform a gene set enrichment analysis (GSEA) with E. coli?
3.4 years ago by
igor
13k
0
votes
1
reply
919
views
Comment:
C: how to calculate TMB from call stats file
3.4 years ago by
igor
13k
1
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0
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4.7k
views
Comment:
C: Timeline for hg39 human genome?
3.4 years ago by
igor
13k
1
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0
replies
1.0k
views
Comment:
C: Changing chromosome names in BAM files
3.4 years ago by
igor
13k
1
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0
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1.3k
views
Comment:
C: Is Bioinformatics enough? Is it taken seriously?
3.4 years ago by
igor
13k
1
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0
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2.9k
views
Comment:
C: Is first strand the sense or the antisense?
3.4 years ago by
igor
13k
0
votes
0
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780
views
Comment:
C: difference between genotyping and sequencing ?
3.4 years ago by
igor
13k
0
votes
0
replies
1.4k
views
Comment:
C: Mutation calling directly from FASTQ files
3.4 years ago by
igor
13k
1
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1
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1.4k
views
Comment:
C: Mutation calling directly from FASTQ files
3.4 years ago by
igor
13k
0
votes
0
replies
1.6k
views
Comment:
C: Tools for hard trimming?
3.4 years ago by
igor
13k
0
votes
1
reply
1.6k
views
Comment:
C: Tools for hard trimming?
3.4 years ago by
igor
13k
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