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724
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Comment: Comment: msigdbr returns the same genesets for mouse as in for human,
9 weeks ago by igor 13k
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1
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724
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Comment: Comment: msigdbr returns the same genesets for mouse as in for human,
10 weeks ago by igor 13k
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1
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613
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Comment: Comment: Single cell cluster evaluation does not output reasonable number of stable clust
3 months ago by igor 13k
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0
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799
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Comment: Comment: How does FASTQC work?
7 months ago by igor 13k
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1
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613
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Comment: Comment: Single cell cluster evaluation does not output reasonable number of stable clust
7 months ago by igor 13k
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0
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894
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Comment: Comment: hg38 low-quality site BED file
7 months ago by igor 13k
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0
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653
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Comment: Comment: Enrichr gene set libraries info
7 months ago by igor 13k
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0
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332
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Answer: Answer: scRNA cluster mapping comparision derived from two different analysis
7 months ago by igor 13k
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1
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653
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Comment: Comment: Enrichr gene set libraries info
7 months ago by igor 13k
1
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0
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906
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Comment: Comment: Can we use UMAP clustering on bulk data?
8 months ago by igor 13k
1
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0
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627
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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
8 months ago by igor 13k
3
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5
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653
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Enrichr gene set libraries info
enrichr
7 months ago by igor 13k
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0
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8.6k
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Comment: Comment: Detecting copy number alterations based on RNA-seq data
10 months ago by igor 13k
10
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11
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8.6k
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Detecting copy number alterations based on RNA-seq data
RNA-Seq CNV copy number
10 months ago by igor 13k
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0
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634
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Comment: Comment: single-cell consensus clustering
10 months ago by igor 13k
2
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3
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634
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single-cell consensus clustering
scrna-seq FlowSOM ConsensusClusterPlus single-cell
10 months ago by igor 13k
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1
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1.4k
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Comment: Comment: How to split a scRNA reads BAM or FASTQ file to a separate file for each cell by
10 months ago by igor 13k
2
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0
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354
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Answer: Answer: Msigdb GO:BP
12 months ago by igor 13k
1
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1
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1.3k
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Comment: Comment: Are there mm39/GRCm39 blacklist regions?
12 months ago by igor 13k
3
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2
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9.2k
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survival analysis with a continuos variable
survival R
updated 14 months ago by • 0 • written 6.3 years ago by 13k
1
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1
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2.3k
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Comment: Comment: Install required dependencies for GATK4 on remote server without root privilege
15 months ago by igor 13k
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0
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779
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Comment: Comment: GSVA from DESeq2
15 months ago by igor 13k
0
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0
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935
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Comment: Comment: diagnosing contamination in RNA-seq data
15 months ago by igor 13k
0
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1
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935
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Comment: Comment: diagnosing contamination in RNA-seq data
15 months ago by igor 13k
1
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0
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6.4k
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Comment: Comment: Combining GSEA (Gene Set Enrichment analysis) and DEG (Differentially Expressed
16 months ago by igor 13k
5
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4
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6.1k
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Calculate distances between items in different GRanges
R bioconductor granges
updated 17 months ago by ▴ 10 • written 6.4 years ago by 13k
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0
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1.1k
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Answer: Answer: scRNA-seq doublets with less features and UMIs than singlets? How?
17 months ago by igor 13k
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1
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1.9k
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Comment: Comment: Why GATK4 doesn't carry out local realignment around indels ?
17 months ago by igor 13k
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1
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1.9k
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Comment: Comment: Why GATK4 doesn't carry out local realignment around indels ?
17 months ago by igor 13k
1
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0
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1.9k
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Comment: Comment: Why GATK4 doesn't carry out local realignment around indels ?
17 months ago by igor 13k
0
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0
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541
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Comment: Comment: Kinship estimation of humans via WES
18 months ago by igor 13k
1
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0
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417
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Answer: Answer: Does Haplotypecaller of GATK find all the mutations?
19 months ago by igor 13k
0
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0
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1.9k
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Answer: Answer: Calculation of gene coverage from BAM file
19 months ago by igor 13k
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1
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1.8k
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Comment: Comment: STAR alignment speed?
19 months ago by igor 13k
1
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1
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1.8k
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Comment: Comment: STAR alignment speed?
19 months ago by igor 13k
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0
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18k
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Answer: Answer: Cell Type Marker Databases?
19 months ago by igor 13k
1
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0
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2.2k
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Comment: Comment: why starsolo estimated cell number very different from cellranger.v5
19 months ago by igor 13k
0
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1
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2.2k
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Comment: Comment: why starsolo estimated cell number very different from cellranger.v5
19 months ago by igor 13k
0
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0
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1.3k
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Comment: Comment: ssGSEA scores correlate with the number of gene counts, should I be worried?
19 months ago by igor 13k
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1
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1.3k
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Comment: Comment: ssGSEA scores correlate with the number of gene counts, should I be worried?
19 months ago by igor 13k
0
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1
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1.3k
views
Comment: Comment: ssGSEA scores correlate with the number of gene counts, should I be worried?
19 months ago by igor 13k
0
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1
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1.3k
views
Comment: Comment: ssGSEA scores correlate with the number of gene counts, should I be worried?
19 months ago by igor 13k
0
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0
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1.9k
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Comment: Comment: ScarHRD
19 months ago by igor 13k
1
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0
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633
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Comment: Comment: sc-RNA matrix appears to be empty
20 months ago by igor 13k
0
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1
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1.9k
views
Answer: Answer: ScarHRD
20 months ago by igor 13k
0
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0
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1.7k
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Comment: Comment: TCGA Isoform Expression Data
20 months ago by igor 13k
1
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0
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2.1k
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Comment: Comment: Bowtie2 hg19 reference for gatk MuTect
21 months ago by igor 13k
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1
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1.2k
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Comment: Comment: Can RNA-Seq be used for TMB calculation?
22 months ago by igor 13k
2
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1
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2.3k
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Answer: Answer: Can I perform scRNAseq data integration without loosing features?
22 months ago by igor 13k
0
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1
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931
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Comment: Comment: error related to annovar software
22 months ago by igor 13k
1,530 results • Page 1 of 31
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