Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.4k
views
Comment: C: Working in R with HTS cluster analysis data
5.1 years ago by seidel 11k
0
votes
0
replies
667
views
Comment: C: biological sequences random seq
5.1 years ago by seidel 11k
1
vote
0
replies
3.6k
views
Answer: A: How to compare two sets of results from Limma?
5.8 years ago by seidel 11k
11
votes
1
reply
13k
views
Answer: A: Which statistical test should be used to test for enrichment of gene lists?
updated 5.8 years ago by 45k • written 11.4 years ago by 11k
1
vote
0
replies
4.1k
views
Comment: C: Comment On The Introduction Of A Bioinformatics Paper
updated 5.8 years ago by 45k • written 11.4 years ago by 11k
1
vote
0
replies
4.5k
views
Answer: A: Physical Lab Notebook for Computational Work
updated 5.8 years ago by 45k • written 11.4 years ago by 11k
0
votes
0
replies
9.4k
views
Comment: C: Is the DAVID knowledgebase not updated any more?
updated 5.9 years ago by 45k • written 11.4 years ago by 11k
0
votes
0
replies
4.0k
views
Answer: A: Gene expression-comparing replicates
updated 5.9 years ago by 45k • written 11.5 years ago by 11k
3
votes
1
reply
14k
views
Answer: A: How to generate a Venn diagram
updated 5.9 years ago by 45k • written 11.5 years ago by 11k
13
votes
3
replies
15k
views
Answer: A: linking ensembl gene ID to GO term?
updated 5.9 years ago by 45k • written 11.5 years ago by 11k
2
votes
0
replies
2.7k
views
Answer: A: Concatenate mutiple samples from tophat to run cuffdiff
updated 5.9 years ago by 45k • written 11.5 years ago by 11k
1
vote
1
reply
9.4k
views
Comment: C: Is the DAVID knowledgebase not updated any more?
updated 5.9 years ago by 45k • written 11.5 years ago by 11k
4
votes
1
reply
6.5k
views
Answer: A: genomicranges outside sequence bounds
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
1
vote
0
replies
3.8k
views
Answer: A: Is there a standard to the range/breaks in z-score coloring for microarray expre
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
0
votes
1
reply
3.9k
views
Comment: C: GRanges: merge metadata from the same ranges
6.0 years ago by seidel 11k
1
vote
1
reply
4.0k
views
Answer: A: Strand Specificity of Arrays and RNAseq
updated 6.0 years ago by 45k • written 10.3 years ago by 11k
1
vote
0
replies
9.6k
views
Comment: C: Why is an Input file used as a control during MACS peak calling?
updated 6.0 years ago by 45k • written 10.3 years ago by 11k
0
votes
1
reply
15k
views
Answer: A: Calculate FPKM value from bam files
updated 6.0 years ago by 45k • written 10.3 years ago by 11k
4
votes
1
reply
4.8k
views
Answer: A: How to calculate differential gene expression from single sample on Affy GeneChi
updated 6.0 years ago by 45k • written 10.3 years ago by 11k
0
votes
0
replies
1.2k
views
Comment: C: how to compare the difference of read counts in a given region
6.0 years ago by seidel 11k
0
votes
1
reply
1.2k
views
Answer: A: how to compare the difference of read counts in a given region
6.0 years ago by seidel 11k
1
vote
1
reply
971
views
Answer: A: Euclidean Clustering and pattern confusion
6.0 years ago by seidel 11k
20
votes
2
replies
41k
views
Answer: A: How To Get The Subclusters From The Object Of Hclust() Using Cutree() According
updated 6.1 years ago by 45k • written 12.0 years ago by 11k
1
vote
1
reply
5.9k
views
Answer: A: Best Workflow For Differential Expression Analysis Using De Novo Transcriptomes
updated 6.1 years ago by 45k • written 11.6 years ago by 11k
0
votes
0
replies
3.0k
views
Answer: A: What Should Be Specified For The "--Mates_File_Ref" Parameter In The Sv Detect T
updated 6.1 years ago by 45k • written 11.7 years ago by 11k
3
votes
1
reply
16k
views
Answer: A: R : File Do Not Exists Error. Isilon File Path Not Recognized In R
updated 6.1 years ago by 45k • written 12.1 years ago by 11k
2
votes
2
replies
4.4k
views
Answer: A: Gene Expression Analysis - Microarrays - Geneset
updated 6.2 years ago by 45k • written 14.0 years ago by 11k
9
votes
1
reply
11k
views
Answer: A: Limma Venn Diagram
updated 6.2 years ago by 45k • written 14.1 years ago by 11k
7
votes
1
reply
5.7k
views
Answer: A: Rna-Seq Transcript Length Bias - Is There A 'Standard' Approach To Accounting Fo
updated 6.2 years ago by 45k • written 14.1 years ago by 11k
3
votes
1
reply
21k
views
Comment: C: How to write a list of DNAStringsets as a FASTA file in R
updated 6.3 years ago by 45k • written 11.1 years ago by 11k
1
vote
0
replies
4.1k
views
Comment: C: How to create custom gtf annotation file?
6.3 years ago by seidel 11k
0
votes
0
replies
5.5k
views
Comment: C: Can I compare TPM values for a transcript across different transcriptome assembl
6.3 years ago by seidel 11k
3
votes
4
replies
3.2k
views
Programmatic access to Sample Information from GEO via GSM or SRR number
GEO
updated 6.4 years ago by 20 • written 6.8 years ago by 11k
0
votes
0
replies
2.6k
views
Comment: C: Seeking for a Linux based script ?
6.8 years ago by seidel 11k
7
votes
0
replies
12k
views
Answer: A: Reproducing this plot in R
6.8 years ago by seidel 11k
3
votes
0
replies
9.9k
views
Answer: A: Creating Count Matrix
6.8 years ago by seidel 11k
0
votes
1
reply
9.9k
views
Comment: C: Creating Count Matrix
6.8 years ago by seidel 11k
0
votes
2
replies
2.2k
views
Comment: C: RNA-Seq Differential gene expression
6.8 years ago by seidel 11k
0
votes
1
reply
3.2k
views
Comment: C: Programmatic access to Sample Information from GEO via GSM or SRR number
6.8 years ago by seidel 11k
2
votes
0
replies
1.4k
views
Answer: A: Perform GO analysis on genome
7.2 years ago by seidel 11k
1
vote
1
reply
7.2k
views
Answer: A: log ratio in gene expression array
updated 7.2 years ago by 45k • written 9.7 years ago by 11k
0
votes
0
replies
37k
views
Answer: A: How To Get Promoter Sequences For Human Genes?
updated 7.2 years ago by 45k • written 11.3 years ago by 11k
0
votes
0
replies
1.5k
views
Comment: C: Affymetrix Soybean Gene 1.1 ST Array PROBES IDs to Ensembl transcripts IDs
7.6 years ago by seidel 11k
0
votes
0
replies
1.4k
views
Comment: C: ORFs extractor tool
7.6 years ago by seidel 11k
1
vote
2
replies
2.1k
views
Comment: C: Comparing work done on RNA seq data
7.6 years ago by seidel 11k
1
vote
0
replies
3.6k
views
Comment: C: What is the meaning of the level in groupGO Clusterprofiler ?
7.6 years ago by seidel 11k
0
votes
0
replies
4.3k
views
Comment: C: single cell RNAseq: From counts or RPKM > PCA > tSNE visualization of PCA
7.6 years ago by seidel 11k
3
votes
0
replies
3.7k
views
Answer: A: What is the difference between gene FPKM and transcript FPKM values?
7.7 years ago by seidel 11k
0
votes
0
replies
1.9k
views
Answer: A: RNAseq analysis Deseq
7.7 years ago by seidel 11k
0
votes
0
replies
7.1k
views
Comment: C: How to interpret heatmap ?
7.7 years ago by seidel 11k
868 results • Page 11 of 18
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6