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replies
1.2k
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Comment:
C: Correct reference for Platinum Genomes?
4.2 years ago by
Len Trigg
★ 1.6k
0
votes
1
reply
4.4k
views
Comment:
C: Why do people not call normal and tumor variant separately for somatic mutation
updated 4.3 years ago by
Ram
43k • written 8.3 years ago by
Len Trigg
★ 1.6k
1
vote
0
replies
4.1k
views
Comment:
C: VCF Record Question
updated 4.5 years ago by
Ram
43k • written 8.8 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
3.1k
views
Comment:
C: How to discover new mutations in a derived strain relative to a reference genome
updated 4.5 years ago by
Ram
43k • written 8.8 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
2.2k
views
Comment:
C: SNP discovery at ambiguous positions - how to keep them and get relevant result
updated 4.7 years ago by
Ram
43k • written 8.8 years ago by
Len Trigg
★ 1.6k
4
votes
1
reply
3.1k
views
Comment:
C: VCF - what are overlapping variants?
4.8 years ago by
Len Trigg
★ 1.6k
1
vote
0
replies
2.1k
views
Comment:
C: why is variant calling difficult?
5.2 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
24k
views
Comment:
C: intersect VCF files
updated 5.6 years ago by
Ram
43k • written 6.4 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
2.4k
views
Comment:
C: Constructing a mean ROC curve based on 5 iterations
5.9 years ago by
Len Trigg
★ 1.6k
1
vote
0
replies
7.6k
views
Comment:
C: compare SV results across samples - Manta, Delly
6.0 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
7.6k
views
Comment:
C: compare SV results across samples - Manta, Delly
6.0 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
13k
views
Comment:
C: MAF vs VAF
6.1 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
3.8k
views
Comment:
C: Can you assume variants not in VCF are all monomorphic for the reference allele?
6.2 years ago by
Len Trigg
★ 1.6k
1
vote
0
replies
2.2k
views
Comment:
C: Strategies to call variants from a cancer sample
6.4 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
8.0k
views
Comment:
C: Edditing headers from a .vcf.gz file
6.4 years ago by
Len Trigg
★ 1.6k
0
votes
2
replies
1.5k
views
Comment:
C: Fasted method to genotype given SNPs from NGS data
6.5 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
3.4k
views
Comment:
C: phasing variants to find de novos
6.5 years ago by
Len Trigg
★ 1.6k
4
votes
1
reply
3.4k
views
Comment:
C: phasing variants to find de novos
6.5 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
3.4k
views
Comment:
C: phasing variants to find de novos
6.5 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
2.5k
views
Comment:
C: Do multiple SNPs exist in same chromosome to be called allele?
6.6 years ago by
Len Trigg
★ 1.6k
1
vote
0
replies
3.9k
views
Comment:
C: Correct way of merging samples for father, mother, child trio variant calling
6.8 years ago by
Len Trigg
★ 1.6k
1
vote
0
replies
7.6k
views
Comment:
C: VCF Files: Help on 0/1 1/1 0/0 1/1 | vs / (phased & unphased
7.1 years ago by
Len Trigg
★ 1.6k
0
votes
1
reply
15k
views
Comment:
C: Split a VCF file into individual sample files
7.1 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
24k
views
Comment:
C: intersect VCF files
7.3 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
5.2k
views
Comment:
C: Genotype representation for male chromosome X and Y
7.7 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
4.0k
views
Comment:
C: how to add pedigree info into VCF
8.1 years ago by
Len Trigg
★ 1.6k
2
votes
1
reply
4.0k
views
Comment:
C: how to add pedigree info into VCF
8.1 years ago by
Len Trigg
★ 1.6k
0
votes
1
reply
2.2k
views
Comment:
C: about the use of varscan, somaticsnipper and samtools
8.2 years ago by
Len Trigg
★ 1.6k
3
votes
0
replies
8.7k
views
Comment:
C: fastq compression tools of choice
8.7 years ago by
Len Trigg
★ 1.6k
1
vote
1
reply
6.5k
views
Comment:
Comment: Substitution error rate and indel error rate from BAM file
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
7.0k
views
Comment:
C: Modifying fasta file based on vcf information
8.9 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
2.8k
views
Comment:
Comment: The CIGAR '=' op for 'sequence match' in SAM - how and why?
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Len Trigg
★ 1.6k
0
votes
1
reply
4.1k
views
Comment:
Comment: How to identify Denovo Mutations in the child compared with parents?
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
1.8k
views
Comment:
C: get a set of reliable SNPs when knowing parent and child relationship
9.1 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
8.8k
views
Comment:
Comment: Comparing Genotypes from NA12878 to that of her parents (NA12891 and NA12892)
updated 24 months ago by
Ram
43k • written 9.2 years ago by
Len Trigg
★ 1.6k
5
votes
1
reply
7.4k
views
Comment:
Comment: VCF header line counting
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
Len Trigg
★ 1.6k
0
votes
0
replies
3.2k
views
Comment:
C: Macrogen Vs Complete Genomics
12.9 years ago by
Len Trigg
★ 1.6k
37 results • Page
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