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1
vote
1
reply
413
views
Comment:
Comment: Ciriquant not configuring hisat2 indexed files
16 hours ago by
Carlo Yague
8.6k
2
votes
1
reply
413
views
Answer:
Answer: Ciriquant not configuring hisat2 indexed files
6 days ago by
Carlo Yague
8.6k
2
votes
1
reply
569
views
Answer:
Answer: Weird Fragment Length distribution multiQC
7 weeks ago by
Carlo Yague
8.6k
3
votes
0
replies
294
views
Answer:
Answer: How is strandedness preserved with PCR (DNA/RNA-seq)
7 weeks ago by
Carlo Yague
8.6k
2
votes
1
reply
670
views
Comment:
Comment: How to convert raw Nanopore R9 fast5 files to fastq files ?
7 weeks ago by
Carlo Yague
8.6k
1
vote
1
reply
670
views
Answer:
Answer: How to convert raw Nanopore R9 fast5 files to fastq files ?
7 weeks ago by
Carlo Yague
8.6k
0
votes
0
replies
1.2k
views
Comment:
Comment: Cannot find summary message after Bowtie2 mapping
5 months ago by
Carlo Yague
8.6k
1
vote
1
reply
830
views
Answer:
Answer: How to find coordinates of TSS from 5pUTR and TTS from 3pUTR in transcriptome/ m
11 months ago by
Carlo Yague
8.6k
1
vote
2
replies
999
views
Answer:
Answer: feature count command error
11 months ago by
Carlo Yague
8.6k
1
vote
0
replies
1.2k
views
Comment:
Comment: tophat2 installation error
11 months ago by
Carlo Yague
8.6k
0
votes
0
replies
585
views
Comment:
Comment: RPKM normalization
11 months ago by
Carlo Yague
8.6k
0
votes
0
replies
486
views
Comment:
Comment: Chip-Seq data for RNA Polymerase 1
11 months ago by
Carlo Yague
8.6k
1
vote
1
reply
585
views
Answer:
Answer: RPKM normalization
11 months ago by
Carlo Yague
8.6k
3
votes
1
reply
619
views
Answer:
Answer: ERCC normalization within DESeq2
11 months ago by
Carlo Yague
8.6k
1
vote
1
reply
1.2k
views
Answer:
Answer: tophat2 installation error
11 months ago by
Carlo Yague
8.6k
0
votes
0
replies
417
views
Comment:
Comment: Choosing a term to call my population of organisms for genetic studies
12 months ago by
Carlo Yague
8.6k
0
votes
1
reply
1.4k
views
Answer:
Answer: extract gene coordinates and TSS from gene list
12 months ago by
Carlo Yague
8.6k
0
votes
1
reply
505
views
Answer:
Answer: DESeq2 replicates in time course data
13 months ago by
Carlo Yague
8.6k
0
votes
1
reply
569
views
Comment:
Comment: Fastq with very poor per tile quality but excellent perbase quality - is this a
17 months ago by
Carlo Yague
8.6k
1
vote
1
reply
862
views
Answer:
Answer: I have a question in Size-selection(SPRI) in ChIP-seq library preparation
19 months ago by
Carlo Yague
8.6k
3
votes
0
replies
586
views
Answer:
Answer: bedtools
20 months ago by
Carlo Yague
8.6k
1
vote
1
reply
730
views
Answer:
Answer: Problem with extracting reverse-reverse read pairs
20 months ago by
Carlo Yague
8.6k
0
votes
0
replies
2.2k
views
Answer:
Answer: Supplementary alignments in BAM-file
21 months ago by
Carlo Yague
8.6k
0
votes
0
replies
1.9k
views
Comment:
Comment: How to convert strand specific RNASEQ bam to bigwig
23 months ago by
Carlo Yague
8.6k
0
votes
0
replies
1.9k
views
Comment:
Comment: Normalization of RNASeq counts with a reference gene (/genes)
23 months ago by
Carlo Yague
8.6k
0
votes
0
replies
746
views
Comment:
Comment: finding coverage of bam file
23 months ago by
Carlo Yague
8.6k
1
vote
2
replies
746
views
Answer:
Answer: finding coverage of bam file
23 months ago by
Carlo Yague
8.6k
0
votes
1
reply
610
views
Answer:
Answer: [bash] No result file is created after hisat2
23 months ago by
Carlo Yague
8.6k
0
votes
0
replies
473
views
Comment:
Comment: how to use custom genome i.e. E. Coli in epic2 ?
23 months ago by
Carlo Yague
8.6k
1
vote
1
reply
1.5k
views
Comment:
Comment: How to conclude two genome sequences have the same origin?
23 months ago by
Carlo Yague
8.6k
1
vote
1
reply
1.5k
views
Answer:
Answer: How to conclude two genome sequences have the same origin?
23 months ago by
Carlo Yague
8.6k
2
votes
0
replies
501
views
Answer:
Answer: Is it possible to find the mutation in RNA-seq reads?
23 months ago by
Carlo Yague
8.6k
2
votes
0
replies
2.6k
views
Comment:
Comment: Genes encoded on both strands of DNA?
23 months ago by
Carlo Yague
8.6k
3
votes
1
reply
2.6k
views
Answer:
Answer: Genes encoded on both strands of DNA?
23 months ago by
Carlo Yague
8.6k
0
votes
1
reply
1.3k
views
Comment:
Comment: Missing data per site
23 months ago by
Carlo Yague
8.6k
1
vote
0
replies
1.3k
views
Comment:
Comment: Can we get an Average Profile of ChIP peaks binding to Transcription "START and
23 months ago by
Carlo Yague
8.6k
1
vote
0
replies
1.3k
views
Comment:
Comment: Missing data per site
23 months ago by
Carlo Yague
8.6k
1
vote
1
reply
1.3k
views
Comment:
Comment: Missing data per site
23 months ago by
Carlo Yague
8.6k
0
votes
1
reply
1.3k
views
Comment:
Comment: Can we get an Average Profile of ChIP peaks binding to Transcription "START and
24 months ago by
Carlo Yague
8.6k
0
votes
0
replies
705
views
Comment:
Comment: PAINS
24 months ago by
Carlo Yague
8.6k
0
votes
1
reply
1.3k
views
Comment:
Comment: Can we get an Average Profile of ChIP peaks binding to Transcription "START and
24 months ago by
Carlo Yague
8.6k
1
vote
0
replies
1.4k
views
Comment:
Comment: How to edit the fasta headers?
24 months ago by
Carlo Yague
8.6k
0
votes
1
reply
1.2k
views
Comment:
Comment: weird alignment results for RNAseq data
24 months ago by
Carlo Yague
8.6k
1
vote
1
reply
888
views
Comment:
Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by
Carlo Yague
8.6k
1
vote
1
reply
888
views
Comment:
Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by
Carlo Yague
8.6k
1
vote
1
reply
929
views
Comment:
Comment: Specific case of "bedtools intersect"
2.0 years ago by
Carlo Yague
8.6k
0
votes
0
replies
769
views
Comment:
Comment: GSEA RNASeq
2.0 years ago by
Carlo Yague
8.6k
1
vote
0
replies
816
views
Comment:
Comment: huge difference when comparing 2 vcf files from the same sample
2.0 years ago by
Carlo Yague
8.6k
0
votes
1
reply
769
views
Comment:
Comment: GSEA RNASeq
2.0 years ago by
Carlo Yague
8.6k
8
votes
1
reply
2.9k
views
Answer:
Answer: Bowtie2 and Hisat2 which tool should I use?
2.0 years ago by
Carlo Yague
8.6k
978 results • Page
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