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8.7k
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Comment: C: How to install Arlequin R package?
8.3 years ago by Carlo Yague 9.0k
1
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2.5k
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Comment: C: Lots of antisense transcripts in my annotation?
8.3 years ago by Carlo Yague 9.0k
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1
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4.1k
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Comment: C: samtools sort stuck during merging
8.3 years ago by Carlo Yague 9.0k
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1
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3.1k
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Answer: A: Clustering and Bedtools
8.3 years ago by Carlo Yague 9.0k
2
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3
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4.1k
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samtools sort stuck during merging
samtools sort bamtools next-gen
8.3 years ago by Carlo Yague 9.0k
0
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1
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3.1k
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Comment: C: Clustering and Bedtools
8.3 years ago by Carlo Yague 9.0k
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6.1k
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Comment: C: How to open bedgraph file in bedGraphtoBigWig
8.3 years ago by Carlo Yague 9.0k
1
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0
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11k
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Comment: C: How to collapseReplicate in DESeq2
8.4 years ago by Carlo Yague 9.0k
0
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1
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3.2k
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Comment: C: how can I see the coverage of my own BED file on UCSC Genome Browser?
8.4 years ago by Carlo Yague 9.0k
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1
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2.7k
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Comment: C: edgeR GLM paired samples analysis - advice required
8.4 years ago by Carlo Yague 9.0k
9
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1
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11k
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Answer: C: How to collapseReplicate in DESeq2
8.4 years ago by Carlo Yague 9.0k
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1
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11k
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Comment: C: How to collapseReplicate in DESeq2
8.4 years ago by Carlo Yague 9.0k
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3.5k
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Comment: C: RNA-seq batch effect correction
8.4 years ago by Carlo Yague 9.0k
0
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0
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17k
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Comment: C: Regarding filter primary alignment
8.4 years ago by Carlo Yague 9.0k
2
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2
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17k
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Answer: A: Regarding filter primary alignment
8.4 years ago by Carlo Yague 9.0k
0
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0
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1.8k
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Comment: C: Counting single end reads
8.4 years ago by Carlo Yague 9.0k
0
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0
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1.3k
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Answer: A: what is the best method to find a conserve amino acid ? and how can I validate i
8.5 years ago by Carlo Yague 9.0k
1
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0
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5.6k
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Answer: A: Normalize bedtools gene coverage by total number of reads
8.5 years ago by Carlo Yague 9.0k
2
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1
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3.7k
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Answer: A: htseq read count zero ?
8.5 years ago by Carlo Yague 9.0k
1
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0
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2.9k
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Comment: C: Interpreting Differentially Expressed Genes(DEGs) from RNA Seq experiment
8.5 years ago by Carlo Yague 9.0k
0
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0
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2.4k
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Comment: C: Question: combining RNAseq data from different platforms
8.5 years ago by Carlo Yague 9.0k
0
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0
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5.5k
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Comment: C: Correct the error in the code
8.5 years ago by Carlo Yague 9.0k
3
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1
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5.5k
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Answer: A: Finding the error in the code
8.5 years ago by Carlo Yague 9.0k
5
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0
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2.9k
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Answer: A: Deseq2 multiple comarison
8.5 years ago by Carlo Yague 9.0k
0
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0
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1.9k
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Comment: C: predict RNA polymerase and promoter sequence interaction by auto dock docking
8.5 years ago by Carlo Yague 9.0k
1
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1
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1.9k
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Answer: A: predict RNA polymerase and promoter sequence interaction by auto dock docking
8.5 years ago by Carlo Yague 9.0k
1
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1
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7.9k
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Comment: C: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.5 years ago by Carlo Yague 9.0k
0
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0
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4.2k
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Comment: C: Best way to address different batches of RNA-seq
8.5 years ago by Carlo Yague 9.0k
0
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1
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4.2k
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Comment: C: Best way to address different batches of RNA-seq
8.5 years ago by Carlo Yague 9.0k
1
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0
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7.9k
views
Comment: C: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.5 years ago by Carlo Yague 9.0k
0
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1
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7.9k
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Comment: C: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.5 years ago by Carlo Yague 9.0k
1
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1
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2.4k
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Comment: C: How to compute global chromosome expression from RNA-Seq
8.6 years ago by Carlo Yague 9.0k
0
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0
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1.8k
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Comment: C: chipseq data analysis
8.6 years ago by Carlo Yague 9.0k
4
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0
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6.8k
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Answer: A: How is logFC and p-value estimated (for volcano plots)?
8.6 years ago by Carlo Yague 9.0k
0
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1
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1.8k
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Answer: A: chipseq data analysis
8.6 years ago by Carlo Yague 9.0k
0
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1
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7.6k
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Comment: C: compute coverage with file.bam and bed : bedtools empty output
8.6 years ago by Carlo Yague 9.0k
1
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0
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2.7k
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Answer: A: Difference in signal-to-noise in MNase-Seq at 100 vs 200 vs 400 million reads
8.6 years ago by Carlo Yague 9.0k
0
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0
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2.7k
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Comment: C: Difference in signal-to-noise in MNase-Seq at 100 vs 200 vs 400 million reads
8.6 years ago by Carlo Yague 9.0k
0
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1
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43k
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Comment: C: What is a gene transcript?
8.6 years ago by Carlo Yague 9.0k
0
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0
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2.7k
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Comment: C: Difference in signal-to-noise in MNase-Seq at 100 vs 200 vs 400 million reads
8.6 years ago by Carlo Yague 9.0k
0
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0
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3.4k
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Comment: C: error with number of fields in bedtools
8.6 years ago by Carlo Yague 9.0k
2
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0
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3.6k
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Answer: A: How to turn a FPKM table in a matrix that can be analyzed in R?
8.6 years ago by Carlo Yague 9.0k
3
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1
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6.6k
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Answer: A: filtering genes out from bam file using samtools
8.7 years ago by Carlo Yague 9.0k
0
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0
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6.6k
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Comment: C: filtering genes out from bam file using samtools
8.7 years ago by Carlo Yague 9.0k
0
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0
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2.4k
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Comment: C: How to exclude noisy CNV from study?
8.7 years ago by Carlo Yague 9.0k
3
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1
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6.8k
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Answer: A: Count non-zero elements along the column and append to table in R
8.7 years ago by Carlo Yague 9.0k
1
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1
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2.8k
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Answer: A: SpliceR visualization tool
8.7 years ago by Carlo Yague 9.0k
4
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1
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2.3k
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Answer: A: RNASeq differential expression: How to deal with few genes with extremely high e
8.7 years ago by Carlo Yague 9.0k
0
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1
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2.4k
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Comment: C: How to exclude noisy CNV from study?
8.7 years ago by Carlo Yague 9.0k
2
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0
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5.0k
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Comment: C: Trimmomatic -> STAR
8.7 years ago by Carlo Yague 9.0k
997 results • Page 13 of 20
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