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Comment: C: How to compute physical per-base coverage from WGS paired-end reads?
8.9 years ago by Carlo Yague 9.0k
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9.4k
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Comment: C: How to compute physical per-base coverage from WGS paired-end reads?
8.9 years ago by Carlo Yague 9.0k
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0
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3.7k
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Comment: C: tophat --max-multihits impacts 'mapped in a proper pair'
9.0 years ago by Carlo Yague 9.0k
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1
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3.7k
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Comment: C: tophat --max-multihits impacts 'mapped in a proper pair'
9.0 years ago by Carlo Yague 9.0k
11
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9
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3.7k
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tophat --max-multihits impacts 'mapped in a proper pair'
RNA-Seq tophat multireads multihits paired-end
updated 9.0 years ago by 13k • written 9.0 years ago by 9.0k
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3.7k
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Comment: C: tophat --max-multihits impacts 'mapped in a proper pair'
9.0 years ago by Carlo Yague 9.0k
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2.9k
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Comment: C: bedtools genomecov produces negative coverage.
9.0 years ago by Carlo Yague 9.0k
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2.9k
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bedtools genomecov produces negative coverage.
RNA-Seq bedtools genomecov coverage
9.0 years ago by Carlo Yague 9.0k
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2.9k
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Comment: C: bedtools genomecov produces negative coverage.
9.0 years ago by Carlo Yague 9.0k
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1
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4.3k
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Answer: A: pairedBamToBed12: converts paired-end BAM to BED12 format, based on bedtools
9.0 years ago by Carlo Yague 9.0k
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1
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3.3k
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Comment: C: Is it better to remove MT reads by removing the MT Chromosome from your fasta or
9.0 years ago by Carlo Yague 9.0k
1
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1
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33k
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Answer: A: GO enrichment analysis using R
9.0 years ago by Carlo Yague 9.0k
3
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2.4k
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Comment: C: NGS tutorials (RNA)
9.0 years ago by Carlo Yague 9.0k
1
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0
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2.8k
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Answer: A: How relevant, valuable, and important is Information Visualization nowadays in B
9.0 years ago by Carlo Yague 9.0k
0
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1
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10k
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Comment: C: ChIPseq - Identical peaks in IP and input samples
9.0 years ago by Carlo Yague 9.0k
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0
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3.6k
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Comment: C: Question about checking the regression assumptions?
9.1 years ago by Carlo Yague 9.0k
0
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1
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3.6k
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Comment: C: Question about checking the regression assumptions?
9.1 years ago by Carlo Yague 9.0k
2
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4.8k
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Comment: C: DESeq2 with a small number of genes
9.1 years ago by Carlo Yague 9.0k
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0
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2.9k
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Answer: A: Where to publish a script?
9.1 years ago by Carlo Yague 9.0k
0
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1
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4.8k
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Comment: C: DESeq2 with a small number of genes
9.1 years ago by Carlo Yague 9.0k
4
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3
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4.8k
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Answer: A: DESeq2 with a small number of genes
9.1 years ago by Carlo Yague 9.0k
1
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1
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5.7k
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Comment: C: Biostars question catagories
9.1 years ago by Carlo Yague 9.0k
1
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1
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6.8k
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Comment: C: What's the role of PCA for quality control of microarray gene expression data?
9.1 years ago by Carlo Yague 9.0k
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0
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11k
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Comment: C: How to interpret the Principal Component Analysis (PCA) results?
9.1 years ago by Carlo Yague 9.0k
1
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1
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1.9k
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Answer: A: Specifying model in DESeq - differentiation experiment
9.1 years ago by Carlo Yague 9.0k
3
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1
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2.1k
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Answer: A: Length of BLAST align sequence as in FASTA format?
9.1 years ago by Carlo Yague 9.0k
1
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0
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5.0k
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Comment: C: Statistical test to compare the number of upregulated genes in a subgroup of gen
9.1 years ago by Carlo Yague 9.0k
0
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1
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11k
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Comment: C: How to interpret the Principal Component Analysis (PCA) results?
9.1 years ago by Carlo Yague 9.0k
1
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0
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2.7k
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Comment: C: Nucleosome Peak Callers
9.1 years ago by Carlo Yague 9.0k
1
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0
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5.0k
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Comment: C: Statistical test to compare the number of upregulated genes in a subgroup of gen
9.1 years ago by Carlo Yague 9.0k
0
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1
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2.7k
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Answer: A: Nucleosome Peak Callers
9.1 years ago by Carlo Yague 9.0k
1
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1
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5.0k
views
Answer: A: Statistical test to compare the number of upregulated genes in a subgroup of gen
9.1 years ago by Carlo Yague 9.0k
1
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1
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2.2k
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Comment: C: Losing half of read counts
9.1 years ago by Carlo Yague 9.0k
0
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1
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6.8k
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Answer: A: What's the role of PCA for quality control of microarray gene expression data?
9.1 years ago by Carlo Yague 9.0k
0
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1
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1.9k
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Comment: C: reading blast result locally thanks
9.1 years ago by Carlo Yague 9.0k
1
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1
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11k
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Answer: A: How to interpret the Principal Component Analysis (PCA) results?
9.1 years ago by Carlo Yague 9.0k
0
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1
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50k
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Comment: C: Creating Interactive Volcano Plots with R and Plot.ly
9.1 years ago by Carlo Yague 9.0k
0
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1
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50k
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Comment: C: Creating Interactive Volcano Plots with R and Plot.ly
9.1 years ago by Carlo Yague 9.0k
0
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0
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1.9k
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Answer: A: Ranking genes from cluster map
9.1 years ago by Carlo Yague 9.0k
1
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0
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2.4k
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Comment: C: How to get negative training set if I don't know what constitutes negative?
9.1 years ago by Carlo Yague 9.0k
0
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0
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2.0k
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Answer: A: Find DEG between sample with replicates and sample without replicates
9.1 years ago by Carlo Yague 9.0k
0
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1
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4.6k
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Comment: C: How can I remove adapter sequence from illumina 2000 paired end data?
9.1 years ago by Carlo Yague 9.0k
0
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1
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4.6k
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Comment: C: How can I remove adapter sequence from illumina 2000 paired end data?
9.1 years ago by Carlo Yague 9.0k
0
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0
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3.4k
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Comment: C: RPKM normalization - small RNA sequencing
9.1 years ago by Carlo Yague 9.0k
1
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1
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3.4k
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Answer: A: RPKM normalization - small RNA sequencing
9.1 years ago by Carlo Yague 9.0k
4
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1
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5.2k
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Comment: C: DGE analysis using stranded and unstranded RNA-seq libraries.
9.1 years ago by Carlo Yague 9.0k
0
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0
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2.8k
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Comment: C: How to retreive all GO daughter terms of a particular Gene Ontology term (e.g. G
9.1 years ago by Carlo Yague 9.0k
0
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0
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2.8k
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Answer: A: How to retreive all GO daughter terms of a particular Gene Ontology term (e.g. G
9.1 years ago by Carlo Yague 9.0k
0
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0
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5.4k
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Comment: C: Outliers detection methods for RNA-Seq data
9.1 years ago by Carlo Yague 9.0k
0
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0
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7.6k
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Comment: C: H3K4Me3 ChIP-Seq signal at promoter
9.2 years ago by Carlo Yague 9.0k
997 results • Page 16 of 20
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