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2
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Comment: Comment: DESeq2 design for two variables and pairwise comparisons
4.5 years ago by Carlo Yague 9.0k
5
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1
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2.7k
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Comment: Comment: DESeq2 adjusted p-values of 0 when p-value > 0.05
4.5 years ago by Carlo Yague 9.0k
5
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3
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5.5k
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Answer: Answer: DESeq2 design for two variables and pairwise comparisons
4.5 years ago by Carlo Yague 9.0k
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0
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13k
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Comment: Comment: ANOVA for RNA-seq data?
4.5 years ago by Carlo Yague 9.0k
0
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2
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13k
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Comment: Comment: ANOVA for RNA-seq data?
4.5 years ago by Carlo Yague 9.0k
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1.2k
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Comment: Comment: Coverage required for 3' end RNA-seq methods
4.5 years ago by Carlo Yague 9.0k
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1.7k
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Comment: Comment: I tried to compare results which I got it from DESeq2, but got this error?
4.5 years ago by Carlo Yague 9.0k
0
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2
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1.7k
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Comment: Comment: I tried to compare results which I got it from DESeq2, but got this error?
4.5 years ago by Carlo Yague 9.0k
1
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0
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1.5k
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Comment: Comment: Assigning small RNA reads
4.5 years ago by Carlo Yague 9.0k
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1
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1.5k
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Comment: Comment: Assigning small RNA reads
4.5 years ago by Carlo Yague 9.0k
1
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2.1k
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Comment: Comment: Joining blast hits together into single fasta sequence
4.6 years ago by Carlo Yague 9.0k
1
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1
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2.1k
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Comment: Comment: Joining blast hits together into single fasta sequence
4.6 years ago by Carlo Yague 9.0k
3
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1.1k
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Answer: Answer: Is it bad practice to change threshold for interaction probability?
4.6 years ago by Carlo Yague 9.0k
1
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1
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2.0k
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Comment: Comment: Convert per base bedgraph to Bed format
4.6 years ago by Carlo Yague 9.0k
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1.0k
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Comment: Comment: How to generate bam files containing the entire read alignments?
4.6 years ago by Carlo Yague 9.0k
0
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0
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1.4k
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Comment: Comment: Comparing Log2 Fold Change Values across all timepoints between two groups in DE
4.6 years ago by Carlo Yague 9.0k
1
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0
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3.0k
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Comment: Comment: Quantification of stranded RNA-seq data
4.6 years ago by Carlo Yague 9.0k
0
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1
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3.0k
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Answer: Answer: Quantification of stranded RNA-seq data
4.6 years ago by Carlo Yague 9.0k
1
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1
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3.0k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
4.6 years ago by Carlo Yague 9.0k
1
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0
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3.0k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
4.6 years ago by Carlo Yague 9.0k
0
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0
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1.3k
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Comment: C: featurecounts -p Paried ends which count total to use as read1 &read 2 give diff
4.6 years ago by Carlo Yague 9.0k
2
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1
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1.3k
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Comment: C: featurecounts -p Paried ends which count total to use as read1 &read 2 give diff
4.6 years ago by Carlo Yague 9.0k
0
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0
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2.9k
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Comment: C: What Are The Best Bioinformatics Course Materials [2020]
4.7 years ago by Carlo Yague 9.0k
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1
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5.2k
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Comment: C: Chip-Seq Data Analysis
4.7 years ago by Carlo Yague 9.0k
0
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1
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4.2k
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Comment: C: Merge bigwig Files with different intervals
4.7 years ago by Carlo Yague 9.0k
0
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1
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4.2k
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Comment: C: Merge bigwig Files with different intervals
4.7 years ago by Carlo Yague 9.0k
0
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0
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4.2k
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Comment: C: Merge bigwig Files with different intervals
4.7 years ago by Carlo Yague 9.0k
0
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1
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4.2k
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Comment: C: Merge bigwig Files with different intervals
4.7 years ago by Carlo Yague 9.0k
1
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0
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965
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Answer: A: Batch-correction of partially confounded RNA-seq data
4.7 years ago by Carlo Yague 9.0k
1
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1
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5.1k
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Comment: C: How to sort fasta file numerically
4.7 years ago by Carlo Yague 9.0k
1
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1
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8.1k
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Answer: A: scatter plot, aov()
4.7 years ago by Carlo Yague 9.0k
0
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0
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1.9k
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Comment: C: Blastn max target sequences
4.7 years ago by Carlo Yague 9.0k
0
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1
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2.4k
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Comment: C: ground truth dataset for BAM read counts
4.7 years ago by Carlo Yague 9.0k
0
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2
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8.7k
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Answer: C: Samtools command not found
4.7 years ago by Carlo Yague 9.0k
1
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1
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4.0k
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Comment: C: TMM normalized TPM
4.7 years ago by Carlo Yague 9.0k
0
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0
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4.0k
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Comment: C: Gene length corrected TMM normalized data
4.7 years ago by Carlo Yague 9.0k
0
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1
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2.4k
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Comment: C: ground truth dataset for BAM read counts
4.7 years ago by Carlo Yague 9.0k
0
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1
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2.4k
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Comment: C: ground truth dataset for BAM read counts
4.7 years ago by Carlo Yague 9.0k
1
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1
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1.7k
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Comment: C: DESeq multiple factor question
4.7 years ago by Carlo Yague 9.0k
1
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1
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1.7k
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Comment: C: DESeq multiple factor question
4.7 years ago by Carlo Yague 9.0k
1
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1
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1.7k
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Answer: A: DESeq multiple factor question
4.7 years ago by Carlo Yague 9.0k
0
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0
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1.4k
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Comment: C: Heatmap of top 20 genes
4.7 years ago by Carlo Yague 9.0k
0
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1
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1.4k
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Comment: C: Heatmap of top 20 genes
4.7 years ago by Carlo Yague 9.0k
2
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0
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1.5k
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Answer: A: Is it necessary to test for multiple correction during differential expression a
4.7 years ago by Carlo Yague 9.0k
3
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1
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1.7k
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Answer: A: Merging chip-seq samples sequenced in two different runs
4.7 years ago by Carlo Yague 9.0k
0
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0
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958
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Comment: C: extract split-read from bam/cram file
4.7 years ago by Carlo Yague 9.0k
0
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1
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1.0k
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Comment: C: Including 2 factors vs 1 factor in Design Formula for DESeq2
4.7 years ago by Carlo Yague 9.0k
1
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0
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3.6k
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Answer: A: featureCounts paired end mode
4.7 years ago by Carlo Yague 9.0k
0
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0
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859
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Comment: C: PCA analysis using DESEq2 pipeline
4.7 years ago by Carlo Yague 9.0k
0
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0
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1.0k
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Answer: A: Regarding tophat output
4.8 years ago by Carlo Yague 9.0k
997 results • Page 6 of 20
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