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Comment: Comment: Deep Sequencing vs Shallow Sequencing but repeated several times
11 weeks ago by d-cameron ★ 2.9k
1
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0
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804
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Comment: Comment: How to whole genome assemble when I have three references
4 months ago by d-cameron ★ 2.9k
0
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1
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804
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Comment: Comment: How to whole genome assemble when I have three references
4 months ago by d-cameron ★ 2.9k
1
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0
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804
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Comment: Comment: How to whole genome assemble when I have three references
4 months ago by d-cameron ★ 2.9k
0
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1
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804
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Comment: Comment: How to whole genome assemble when I have three references
4 months ago by d-cameron ★ 2.9k
0
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0
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1.6k
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Comment: Comment: paired end mapping with one end being unique and the other end multiple
18 months ago by d-cameron ★ 2.9k
0
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1
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1.7k
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Comment: Comment: Unaligned Reads From Bowtie2
19 months ago by d-cameron ★ 2.9k
0
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0
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1.5k
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Comment: Comment: Extracting only soft/hard clipped reads from a bam file
19 months ago by d-cameron ★ 2.9k
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0
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943
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Comment: Comment: SV with identical start and end positions
20 months ago by d-cameron ★ 2.9k
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2
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943
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Comment: Comment: SV with identical start and end positions
20 months ago by d-cameron ★ 2.9k
0
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1
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2.2k
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Comment: Comment: AF = 0.5 in chrX, VCF of a male
21 months ago by d-cameron ★ 2.9k
0
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1
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2.6k
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Comment: Comment: Tabix '[E::get_intv] Failed to parse TBX_VCF' error
21 months ago by d-cameron ★ 2.9k
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0
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422
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Comment: Comment: How to bin how many alignments a read maps
23 months ago by d-cameron ★ 2.9k
0
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0
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444
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Comment: Comment: Detect a sequence without assembling... and counting number of reads?
24 months ago by d-cameron ★ 2.9k
3
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2
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1.6k
views
Comment: Comment: paired end mapping with one end being unique and the other end multiple
2.0 years ago by d-cameron ★ 2.9k
2
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0
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1.6k
views
Comment: Comment: paired end mapping with one end being unique and the other end multiple
2.0 years ago by d-cameron ★ 2.9k
1
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0
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757
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Comment: Comment: Calling variants after using different read alignment programs
2.1 years ago by d-cameron ★ 2.9k
1
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0
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2.1k
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Comment: Comment: Are not all duplicated reads removed when applying removal duplicated algorithms
2.1 years ago by d-cameron ★ 2.9k
2
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0
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4.5k
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Comment: Comment: Structural Variants (SV) Manta output interpretation: MantaBND and translocation
2.1 years ago by d-cameron ★ 2.9k
0
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0
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4.2k
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Comment: Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite
2.7 years ago by d-cameron ★ 2.9k
0
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0
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1.8k
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Comment: Comment: Issue with samtools reheader, bam file
2.8 years ago by d-cameron ★ 2.9k
0
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0
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842
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Comment: Comment: adding a contig fasta to reference genome fasta
2.8 years ago by d-cameron ★ 2.9k
0
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0
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1.8k
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Comment: Comment: Issue with samtools reheader, bam file
2.8 years ago by d-cameron ★ 2.9k
0
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0
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3.1k
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Comment: Comment: BAM File, Change chromosome notation
2.8 years ago by d-cameron ★ 2.9k
0
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0
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5.3k
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Comment: Comment: BWA MEM Definition of a Primary Alignment
2.9 years ago by d-cameron ★ 2.9k
0
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1
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10.0k
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Comment: Comment: samtools multithreads
3.1 years ago by d-cameron ★ 2.9k
1
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0
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1.8k
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Comment: C: Revert bam to fastq
3.6 years ago by d-cameron ★ 2.9k
0
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1
reply
1.1k
views
Comment: A: what the mean of Genomic content
3.6 years ago by d-cameron ★ 2.9k
0
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0
replies
969
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Comment: C: HPV EBV typing from cancer genome data
3.7 years ago by d-cameron ★ 2.9k
0
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0
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2.1k
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Comment: C: how to output the best alignment rather than multiple alignments for each read i
4.0 years ago by d-cameron ★ 2.9k
0
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0
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1.6k
views
Comment: C: Why Samtools view don't extract sequence out of the given region?
4.0 years ago by d-cameron ★ 2.9k
0
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0
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1.4k
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Comment: C: The center in scatter plot generated by CNVkit looks off
4.1 years ago by d-cameron ★ 2.9k
0
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1
reply
1.4k
views
Comment: C: The center in scatter plot generated by CNVkit looks off
4.1 years ago by d-cameron ★ 2.9k
0
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1
reply
1.4k
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Comment: C: The center in scatter plot generated by CNVkit looks off
4.1 years ago by d-cameron ★ 2.9k
0
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0
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943
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Comment: C: Extract SV indicating pair-end reads
4.1 years ago by d-cameron ★ 2.9k
0
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0
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943
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Comment: C: Extract SV indicating pair-end reads
4.1 years ago by d-cameron ★ 2.9k
0
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0
replies
2.2k
views
Comment: C: fusion detection for DNA Sequencing data
4.1 years ago by d-cameron ★ 2.9k
0
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1
reply
6.0k
views
Comment: C: bwa mem memory allocation, threads and nodes
4.2 years ago by d-cameron ★ 2.9k
0
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1
reply
1.7k
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Comment: C: Number of Tandem and Interspersed duplications
4.6 years ago by d-cameron ★ 2.9k
0
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1
reply
1.7k
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Comment: C: Number of Tandem and Interspersed duplications
4.6 years ago by d-cameron ★ 2.9k
0
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0
replies
2.5k
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Comment: C: identifying transgene insertion site in WGS
4.8 years ago by d-cameron ★ 2.9k
0
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0
replies
5.3k
views
Comment: C: BWA MEM Definition of a Primary Alignment
4.9 years ago by d-cameron ★ 2.9k
0
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1
reply
2.5k
views
Comment: C: identifying transgene insertion site in WGS
5.0 years ago by d-cameron ★ 2.9k
0
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0
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1.3k
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Comment: C: Extract Hard-clipped and soft-clipped values from fifth column
5.4 years ago by d-cameron ★ 2.9k
0
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0
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1.2k
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Comment: C: Help with .sam files _1,_2 from bowtie2 output into svDetect
5.4 years ago by d-cameron ★ 2.9k
2
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1
reply
2.1k
views
Comment: C: How to check breakpoint after detecting a CNV.
5.4 years ago by d-cameron ★ 2.9k
0
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0
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15k
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Comment: C: What does <*> mean in a vcf file?
5.4 years ago by d-cameron ★ 2.9k
0
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1
reply
12k
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Comment: C: annotation of SV (structural variants)
5.4 years ago by d-cameron ★ 2.9k
0
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0
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6.5k
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Comment: C: NGS data simulation: VarSim or BAMSurgeon?
5.4 years ago by d-cameron ★ 2.9k
0
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1
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1.4k
views
Comment: C: Assembling a sequence from the pairs of letters (X,Y)
5.8 years ago by d-cameron ★ 2.9k
168 results • Page 1 of 4
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