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Comment: C: identifying transgene insertion site in WGS
4.8 years ago by d-cameron ★ 2.9k
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5.3k
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Answer: A: BWA MEM Definition of a Primary Alignment
4.9 years ago by d-cameron ★ 2.9k
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5.3k
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Comment: C: BWA MEM Definition of a Primary Alignment
4.9 years ago by d-cameron ★ 2.9k
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2.1k
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Answer: A: how to output the best alignment rather than multiple alignments for each read i
5.0 years ago by d-cameron ★ 2.9k
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1
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2.5k
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Comment: C: identifying transgene insertion site in WGS
5.1 years ago by d-cameron ★ 2.9k
2
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2
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2.5k
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Answer: A: identifying transgene insertion site in WGS
5.1 years ago by d-cameron ★ 2.9k
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0
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1.9k
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Answer: A: Why call variant generate homozygous site with genotype 0/0, why it be reporte
5.1 years ago by d-cameron ★ 2.9k
3
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1
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2.5k
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Answer: A: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
5.3 years ago by d-cameron ★ 2.9k
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0
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1.3k
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Comment: C: Extract Hard-clipped and soft-clipped values from fifth column
5.4 years ago by d-cameron ★ 2.9k
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0
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1.2k
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Comment: C: Help with .sam files _1,_2 from bowtie2 output into svDetect
5.4 years ago by d-cameron ★ 2.9k
2
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1
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2.1k
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Comment: C: How to check breakpoint after detecting a CNV.
5.4 years ago by d-cameron ★ 2.9k
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0
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15k
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Comment: C: What does <*> mean in a vcf file?
5.4 years ago by d-cameron ★ 2.9k
0
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1
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12k
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Comment: C: annotation of SV (structural variants)
5.5 years ago by d-cameron ★ 2.9k
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0
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6.5k
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Comment: C: NGS data simulation: VarSim or BAMSurgeon?
5.5 years ago by d-cameron ★ 2.9k
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1
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1.4k
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Comment: C: Assembling a sequence from the pairs of letters (X,Y)
5.9 years ago by d-cameron ★ 2.9k
2
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2
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2.4k
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Answer: A: Create a File format to store Variant
5.9 years ago by d-cameron ★ 2.9k
1
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0
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2.9k
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Comment: C: sortsam (picard) error in identifyting samfile
5.9 years ago by d-cameron ★ 2.9k
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0
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3.0k
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Comment: C: Does BWA mem ever discard or modify data
5.9 years ago by d-cameron ★ 2.9k
0
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0
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3.0k
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Comment: C: Does BWA mem ever discard or modify data
5.9 years ago by d-cameron ★ 2.9k
2
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1
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3.1k
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Comment: C: How to run IGV
5.9 years ago by d-cameron ★ 2.9k
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1
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3.2k
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Comment: C: bowtie2 paired end insertion length
5.9 years ago by d-cameron ★ 2.9k
0
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1
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3.2k
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Comment: C: bowtie2 paired end insertion length
5.9 years ago by d-cameron ★ 2.9k
3
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1
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3.2k
views
Answer: A: bowtie2 paired end insertion length
5.9 years ago by d-cameron ★ 2.9k
1
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1
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1.4k
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Answer: A: assembling a sequence from the pairs of letters (X,Y)
5.9 years ago by d-cameron ★ 2.9k
2
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0
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3.3k
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Answer: A: Difference between marking duplicates and filtering BAM on phred score
5.9 years ago by d-cameron ★ 2.9k
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0
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3.1k
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Answer: A: Generate the sequence dictionary
5.9 years ago by d-cameron ★ 2.9k
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1
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3.2k
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Comment: C: Split sequence according the 'N' base
5.9 years ago by d-cameron ★ 2.9k
1
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0
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1.6k
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Answer: A: Aligning to ultra-short reference sequence
5.9 years ago by d-cameron ★ 2.9k
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0
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1.0k
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Answer: A: VCF Format - how to create the underlying seqeuence
6.0 years ago by d-cameron ★ 2.9k
0
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1
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3.0k
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Comment: C: How to merge chr+strand+coordinate+score from multiple files?
6.0 years ago by d-cameron ★ 2.9k
1
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2
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159k
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Comment: C: Extract Reads From A Bam File That Fall Within A Given Region
6.0 years ago by d-cameron ★ 2.9k
0
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1
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1.8k
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Comment: C: have trouble with bowtie2
6.0 years ago by d-cameron ★ 2.9k
0
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1
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1.8k
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Answer: A: Copy number variation detection
6.0 years ago by d-cameron ★ 2.9k
1
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0
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2.8k
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Comment: C: Workflows! Where is the code?
6.0 years ago by d-cameron ★ 2.9k
0
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0
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2.4k
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Answer: A: Fastq file size after splitting bam
6.0 years ago by d-cameron ★ 2.9k
3
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0
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985
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Answer: A: reduce size of string
6.0 years ago by d-cameron ★ 2.9k
0
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1
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1.2k
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Comment: C: Any tools that can score for alignment of two short sequences allowing ambiguous
6.0 years ago by d-cameron ★ 2.9k
2
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1
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1.2k
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Comment: C: Any tools that can score for alignment of two short sequences allowing ambiguous
6.0 years ago by d-cameron ★ 2.9k
0
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1
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7.6k
views
Comment: C: compare SV results across samples - Manta, Delly
6.0 years ago by d-cameron ★ 2.9k
1
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1
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7.6k
views
Answer: A: compare SV results across samples - Manta, Delly
6.0 years ago by d-cameron ★ 2.9k
1
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1
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7.6k
views
Comment: C: compare SV results across samples - Manta, Delly
6.0 years ago by d-cameron ★ 2.9k
2
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0
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7.0k
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Comment: C: Calculate Mapping Rate for an alignment to each sequence of a multi-fasta refere
6.0 years ago by d-cameron ★ 2.9k
0
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0
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2.6k
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Comment: C: SAM CIGAR parsing and position counter in R
6.0 years ago by d-cameron ★ 2.9k
0
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1
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2.6k
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Comment: C: SAM CIGAR parsing and position counter in R
6.0 years ago by d-cameron ★ 2.9k
1
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0
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1.7k
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Comment: C: Determine Insertion Sequence
6.0 years ago by d-cameron ★ 2.9k
0
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0
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1.7k
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Comment: C: Determine Insertion Sequence
6.0 years ago by d-cameron ★ 2.9k
1
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2
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1.7k
views
Comment: C: Determine Insertion Sequence
6.0 years ago by d-cameron ★ 2.9k
2
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1
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1.7k
views
Answer: A: Determine Insertion Sequence
6.0 years ago by d-cameron ★ 2.9k
2
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0
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1.2k
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Answer: A: Best DOI provider for a custom genome index ?
6.0 years ago by d-cameron ★ 2.9k
1
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0
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9.1k
views
Comment: C: NGS analysis: how to handle paired-end reads
6.1 years ago by d-cameron ★ 2.9k
325 results • Page 3 of 7
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