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Comment: C: Problem for separating reverse and forward reading in my RNA-seq
5.9 years ago by Eric Lim ★ 2.1k
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1.5k
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Comment: C: Filter sam/bam files
5.9 years ago by Eric Lim ★ 2.1k
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2.9k
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Comment: C: Venue to publish a bioinformatics tool
5.9 years ago by Eric Lim ★ 2.1k
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1.5k
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Answer: A: Can't find chr1 in a large fasta file using samtools/htsjdk
5.9 years ago by Eric Lim ★ 2.1k
2
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2.1k
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Answer: A: Best way to systematically select ENCODE data to download?
5.9 years ago by Eric Lim ★ 2.1k
1
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1
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2.4k
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Comment: C: Issue with reverting bam file back to fastq files
5.9 years ago by Eric Lim ★ 2.1k
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0
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3.4k
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Comment: C: Splice junction sites and number of splitted reads from STAR aligned bam
5.9 years ago by Eric Lim ★ 2.1k
1
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1
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3.4k
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Comment: C: Splice junction sites and number of splitted reads from STAR aligned bam
5.9 years ago by Eric Lim ★ 2.1k
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0
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4.7k
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Comment: C: Error with snakemake
5.9 years ago by Eric Lim ★ 2.1k
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1
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3.2k
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Comment: C: samtools and docker
6.0 years ago by Eric Lim ★ 2.1k
1
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1
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3.2k
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Answer: A: samtools and docker
6.0 years ago by Eric Lim ★ 2.1k
1
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2.8k
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Comment: C: Workflows! Where is the code?
6.0 years ago by Eric Lim ★ 2.1k
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1.2k
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Comment: C: How to fillna() in Pandas pivoted tables
6.0 years ago by Eric Lim ★ 2.1k
0
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1
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1.2k
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Comment: C: How to fillna() in Pandas pivoted tables
6.0 years ago by Eric Lim ★ 2.1k
0
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4
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1.2k
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How to fillna() in Pandas pivoted tables
pandas
6.0 years ago by Eric Lim ★ 2.1k
5
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3.4k
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Answer: A: changing the name of files
6.0 years ago by Eric Lim ★ 2.1k
3
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15k
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Answer: A: Biopython: SeqIO.write () function to write dictionary object to fasta file
6.0 years ago by Eric Lim ★ 2.1k
0
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5.2k
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Comment: C: R or python, which one do you prefer in analysing scRNAseq datasets?
6.0 years ago by Eric Lim ★ 2.1k
1
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0
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15k
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Comment: C: Biopython: SeqIO.write () function to write dictionary object to fasta file
6.0 years ago by Eric Lim ★ 2.1k
1
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0
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15k
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Comment: C: Biopython: SeqIO.write () function to write dictionary object to fasta file
6.0 years ago by Eric Lim ★ 2.1k
0
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1
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9.1k
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Comment: C: Cannot install NumPy using pip and import it
6.0 years ago by Eric Lim ★ 2.1k
3
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1
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9.1k
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Answer: A: Cannot install NumPy using pip and import it
6.0 years ago by Eric Lim ★ 2.1k
0
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0
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880
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Comment: C: Oncotator for non-Human species
6.0 years ago by Eric Lim ★ 2.1k
0
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2.0k
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Comment: C: About bioinformatics thesis
6.0 years ago by Eric Lim ★ 2.1k
1
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2.5k
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Answer: A: How do you organize sequence data (FASTQs)?
6.1 years ago by Eric Lim ★ 2.1k
1
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1.1k
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Comment: C: Batch query reference nucleotide
6.1 years ago by Eric Lim ★ 2.1k
0
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3.1k
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Comment: C: how to distinguish pre-mRNA and mature mRNA from my nuclear RNA-seq data?
6.1 years ago by Eric Lim ★ 2.1k
3
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1.5k
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Comment: C: Workflow for Releasing HPC Pipeline via Docker
6.1 years ago by Eric Lim ★ 2.1k
0
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0
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1.6k
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News: Bias, robustness and scalability in single-cell differential expression analysis
RNA-Seq
updated 12 months ago by 43k • written 6.2 years ago by ★ 2.1k
2
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0
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5.6k
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Answer: A: STAR using splice junctions from SJ.out to find flanking exons (GRCh37)
6.2 years ago by Eric Lim ★ 2.1k
0
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2.7k
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Comment: C: How to make large .tsv/.csv files more accessible for desktop users?
6.3 years ago by Eric Lim ★ 2.1k
0
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1
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2.7k
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Comment: C: How to make large .tsv/.csv files more accessible for desktop users?
6.3 years ago by Eric Lim ★ 2.1k
1
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2.6k
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Answer: A: remove sequences with non-canonical nucleotides from fasta file
6.3 years ago by Eric Lim ★ 2.1k
0
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0
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1.2k
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Comment: C: Can anyone help me to confirm the number of matched tumor and normal samples in
6.3 years ago by Eric Lim ★ 2.1k
1
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1
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2.4k
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Comment: C: I'm putting a pipeline into docker, where do I store the tar files for my depend
6.3 years ago by Eric Lim ★ 2.1k
1
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1
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2.4k
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Answer: A: I'm putting a pipeline into docker, where do I store the tar files for my depend
6.3 years ago by Eric Lim ★ 2.1k
0
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0
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1.4k
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Job: Scientist/Senior Scientist, Bioinformatics at Stoke Therapeutics, Inc, Bedford, MA, USA
rna-biology splicing
updated 12 months ago by 43k • written 6.4 years ago by ★ 2.1k
0
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0
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1.6k
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Answer: A: Doing RNA folding online for 1200 nt long sequence
6.4 years ago by Eric Lim ★ 2.1k
0
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0
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6.5k
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Comment: C: Bioinformatic or bioinformatics?
6.4 years ago by Eric Lim ★ 2.1k
0
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0
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1.8k
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Comment: C: Sequence Data Management
6.4 years ago by Eric Lim ★ 2.1k
1
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0
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2.1k
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Comment: C: is always necessary to do an intermediate index generations and 2nd pass alignme
6.5 years ago by Eric Lim ★ 2.1k
0
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0
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9.8k
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Comment: C: Extracting 5'UTR and 3'UTR bed files from gtf file
6.5 years ago by Eric Lim ★ 2.1k
1
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0
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6.5k
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Answer: A: How to make your snakefiles self-documenting
7.2 years ago by Eric Lim ★ 2.1k
1
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0
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1.5k
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Comment: C: Genome Browser and Custom Tracks
7.2 years ago by Eric Lim ★ 2.1k
1
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1
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1.5k
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Comment: C: Genome Browser and Custom Tracks
7.2 years ago by Eric Lim ★ 2.1k
0
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0
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4.2k
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Comment: C: Beginner in Python- translating DNA given in GenBank file format into its six re
7.4 years ago by Eric Lim ★ 2.1k
0
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0
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2.1k
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Comment: C: How can link up ENSG identifiers with Uniprot identifiers by biopython libraries
7.4 years ago by Eric Lim ★ 2.1k
0
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0
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6.7k
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Comment: C: Problem installing STAR on Mac OSX
7.5 years ago by Eric Lim ★ 2.1k
3
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1
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6.7k
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Answer: A: Problem installing STAR on Mac OSX
7.5 years ago by Eric Lim ★ 2.1k
0
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0
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2.1k
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Comment: C: Question about potentially mutation causing protein
7.5 years ago by Eric Lim ★ 2.1k
231 results • Page 4 of 5
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