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1
vote
4
replies
3.1k
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From WGBS-seq to DMR calling and annotation
sequencing
R
5.9 years ago by
zhengyunchaosky
▴ 20
1
vote
1
reply
1.3k
views
Can reseq data set with different read lengths generated from Trimmomatic be used to detect SV, CNV etc through BreakDancer, CNVnator, Pindel etc?
genome
sequencing
next-gen
updated 8.2 years ago by
Biostar
20 • written 8.3 years ago by
zhengyunchaosky
▴ 20
0
votes
2
replies
5.5k
views
snpEff warning information
SNP
genome
updated 21 months ago by
Ram
43k • written 8.4 years ago by
zhengyunchaosky
▴ 20
1
vote
2
replies
9.3k
views
Trimmomatic adapter fasta file preparation
genome
software-error
updated 21 months ago by
Ram
43k • written 8.4 years ago by
zhengyunchaosky
▴ 20
1
vote
1
reply
2.1k
views
whole genome sequencing data QC problem (different performance of different softwares)
sequencing
genome
updated 21 months ago by
Ram
43k • written 8.4 years ago by
zhengyunchaosky
▴ 20
3
votes
2
replies
2.2k
views
How to make snp calling with GATK under the same depth come true?
SNP
8.4 years ago by
zhengyunchaosky
▴ 20
0
votes
2
replies
2.7k
views
GATK --ploidy
SNP
updated 21 months ago by
Ram
43k • written 8.4 years ago by
zhengyunchaosky
▴ 20
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