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Comment: Comment: Why did my data get worse after trimming with trimmomatic?
2.8 years ago by benformatics 4.2k
0
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1
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1.8k
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Comment: Comment: Human transcriptome STAR multi-mapped problem
2.9 years ago by benformatics 4.2k
1
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2
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5.2k
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Comment: Comment: How to find rna strand direction before alignment?
2.9 years ago by benformatics 4.2k
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2
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5.2k
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Comment: Comment: How to find rna strand direction before alignment?
2.9 years ago by benformatics 4.2k
1
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0
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1.4k
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Answer: Answer: Does anyone have experience using findtail?
2.9 years ago by benformatics 4.2k
1
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0
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5.2k
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Answer: Answer: How to find rna strand direction before alignment?
2.9 years ago by benformatics 4.2k
1
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0
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793
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Answer: Answer: comparison of conditions scRNA-seq
2.9 years ago by benformatics 4.2k
0
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1
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12k
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Comment: Comment: CPM or TPM in GSEA analysis
2.9 years ago by benformatics 4.2k
1
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1
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1.8k
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Answer: Answer: Treating "patient" as a batch effect
2.9 years ago by benformatics 4.2k
0
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1
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1.8k
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Comment: Comment: Proportion of mitochondrial reads atac seq
2.9 years ago by benformatics 4.2k
1
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2
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1.8k
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Answer: Answer: Proportion of mitochondrial reads atac seq
3.0 years ago by benformatics 4.2k
1
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0
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1.0k
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Answer: Answer: PolyA Tail Detection in RNA-seq data
3.0 years ago by benformatics 4.2k
1
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1
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1.3k
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Answer: Answer: Extract list of mapped UMIs in cell ranger output
3.0 years ago by benformatics 4.2k
2
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0
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3.2k
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Answer: Answer: How to get the canonical transcript from gene ensemble ID
3.0 years ago by benformatics 4.2k
2
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1
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1.2k
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Answer: Answer: Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
3.0 years ago by benformatics 4.2k
4
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0
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12k
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Answer: Answer: Does a PhD or work experience set you up better to do bioinformatics work in ind
21 months ago by benformatics 4.2k
0
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1
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1.3k
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Answer: Answer: How to convert trinotate results into GFF3
3.0 years ago by benformatics 4.2k
1
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1
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1.7k
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Answer: Answer: How to tell if GEO SRA is paired or single?
3.0 years ago by benformatics 4.2k
1
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0
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3.9k
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Comment: Comment: How much RAM for scRNAseq 200K cells?
3.0 years ago by benformatics 4.2k
0
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0
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1.6k
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Comment: Comment: scRNA-Seq datasets with labels
3.0 years ago by benformatics 4.2k
1
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0
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3.5k
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Answer: Answer: Which Bioinformatics Master's degree is better?
3.0 years ago by benformatics 4.2k
0
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0
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920
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Answer: Answer: Protein sequence from a gene fusion?
3.0 years ago by benformatics 4.2k
0
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1
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1.0k
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Comment: Comment: Does chemistry have significant effects on my single nucleus dataset?
3.0 years ago by benformatics 4.2k
1
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0
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1.8k
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Comment: Comment: How can I get counts from transgenic expression in RNA-seq data?
3.0 years ago by benformatics 4.2k
3
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3
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1.8k
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Answer: Answer: How can I get counts from transgenic expression in RNA-seq data?
3.0 years ago by benformatics 4.2k
0
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0
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1.8k
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Comment: Comment: Why an extremely large number of reads are mapped to several chromosomes in RNA-
3.0 years ago by benformatics 4.2k
1
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1
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1.6k
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Comment: Comment: scRNA-Seq datasets with labels
3.0 years ago by benformatics 4.2k
1
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0
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2.8k
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Comment: Comment: Quantseq 3' seq alignment with kallisto
3.0 years ago by benformatics 4.2k
0
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1
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2.8k
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Answer: Answer: Quantseq 3' seq alignment with kallisto
3.0 years ago by benformatics 4.2k
0
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0
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2.4k
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Comment: Comment: convert a list of plotly plots to an HTML output
3.0 years ago by benformatics 4.2k
0
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1
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2.4k
views
Answer: Answer: convert a list of plotly plots to an HTML output
3.0 years ago by benformatics 4.2k
0
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1
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4.3k
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Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
3.0 years ago by benformatics 4.2k
0
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1
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2.0k
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Comment: Comment: Public availability of de-identified patient data
3.1 years ago by benformatics 4.2k
1
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0
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5.0k
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Answer: Answer: How to select rows which has NA in any column in the dataframe in R?
3.1 years ago by benformatics 4.2k
0
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0
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968
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Comment: Comment: Error in mitch reports in R
3.1 years ago by benformatics 4.2k
0
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0
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1.3k
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Answer: Answer: To order list of genes
3.1 years ago by benformatics 4.2k
0
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0
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3.0k
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Comment: Comment: Unaligned Reads From Bowtie2
3.1 years ago by benformatics 4.2k
0
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1
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4.3k
views
Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
3.1 years ago by benformatics 4.2k
1
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1
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2.1k
views
Answer: Answer: HELP- analysis RNa-seq from GEO
3.1 years ago by benformatics 4.2k
0
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0
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1.1k
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Answer: Answer: How to get/make a .gf file? rmats2sashimi
3.1 years ago by benformatics 4.2k
0
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0
replies
1.5k
views
Comment: Comment: Allele flip in GATK
3.1 years ago by benformatics 4.2k
0
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1
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3.0k
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Comment: Comment: Unaligned Reads From Bowtie2
3.1 years ago by benformatics 4.2k
0
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0
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3.8k
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Comment: Comment: star --readFilesIn error when using unmapped.out.mate1/2 files
3.1 years ago by benformatics 4.2k
1
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1
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4.3k
views
Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
3.1 years ago by benformatics 4.2k
0
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0
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915
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Answer: Answer: Need an original PacBio SMRT Sequel fastq file from 2020
3.1 years ago by benformatics 4.2k
1
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0
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1.1k
views
Comment: Comment: Manually adding genes of interest to transcriptome for RNASeq DE?
3.1 years ago by benformatics 4.2k
3
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0
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1.6k
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Answer: Answer: Conceptual questions regarding computational genome/annotation versions and the
3.1 years ago by benformatics 4.2k
0
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1
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1.1k
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Answer: Answer: Low expression of key transcripts in scRNAseq dataset after deeper sequencing
3.1 years ago by benformatics 4.2k
0
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0
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1.1k
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Comment: Comment: How to analyse different sample number fastq files
3.1 years ago by benformatics 4.2k
0
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0
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1.1k
views
Answer: Answer: Irreproducibility Discovery Rate for broad histone marks.
3.1 years ago by benformatics 4.2k
503 results • Page 3 of 11
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