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264
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Answer: Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
4 days ago by benformatics 3.5k
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254
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Answer: Answer: Recommendation for (Alternative) Splicing analysis packages for bulk RNA-seq da
7 days ago by benformatics 3.5k
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173
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Comment: Comment: advice on course selection for a bioinformatics career.
8 days ago by benformatics 3.5k
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226
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Comment: Comment: Processing fastqs generated by inDrop protocol
9 days ago by benformatics 3.5k
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305
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Comment: Comment: samtools idxstats not removing ChrM
9 days ago by benformatics 3.5k
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1
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258
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Comment: Comment: Problem in converting SAM to BAM file by DROP SEQ
9 days ago by benformatics 3.5k
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305
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Comment: Comment: samtools idxstats not removing ChrM
9 days ago by benformatics 3.5k
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0
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366
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Comment: Comment: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
19 days ago by benformatics 3.5k
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1
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251
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Comment: Comment: CABSDock:fortran 2018 deleted feature
27 days ago by benformatics 3.5k
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0
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260
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Answer: Answer: RNA seq analysis differential expression analysis
28 days ago by benformatics 3.5k
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1
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211
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Comment: Comment: Bar plots at genera level with absolute percentage difference between two groups
29 days ago by benformatics 3.5k
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1.0k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
29 days ago by benformatics 3.5k
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1
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1.0k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
4 weeks ago by benformatics 3.5k
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1
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1.0k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
4 weeks ago by benformatics 3.5k
0
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1
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1.0k
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Answer: Answer: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
4 weeks ago by benformatics 3.5k
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342
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Comment: Comment: RNAseq matrix containing zero values
5 weeks ago by benformatics 3.5k
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209
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Answer: Answer: Mate-pair sequencing
8 weeks ago by benformatics 3.5k
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1.9k
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Comment: Comment: GSEA from broad institute normalization method
9 weeks ago by benformatics 3.5k
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425
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Comment: Comment: change color and scale in SpatialFeaturePlot
9 weeks ago by benformatics 3.5k
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1
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363
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Comment: Comment: Some questions on RAD paired-end sequencing
9 weeks ago by benformatics 3.5k
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1
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363
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Answer: Answer: Some questions on RAD paired-end sequencing
9 weeks ago by benformatics 3.5k
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0
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575
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
10 weeks ago by benformatics 3.5k
3
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5
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575
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How to remove un-paired reads from BAM after filtering?
unmapped picard samtools
10 weeks ago by benformatics 3.5k
2
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1
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575
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Answer: Answer: How to remove un-paired reads from BAM after filtering?
10 weeks ago by benformatics 3.5k
0
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1
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575
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
10 weeks ago by benformatics 3.5k
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0
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429
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Comment: Comment: What exactly are unmappable regions?
11 weeks ago by benformatics 3.5k
3
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1
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513
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Comment: Comment: Why did my data get worse after trimming with trimmomatic?
11 weeks ago by benformatics 3.5k
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1
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491
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Comment: Comment: Human transcriptome STAR multi-mapped problem
3 months ago by benformatics 3.5k
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2
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1.1k
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Comment: Comment: How to find rna strand direction before alignment?
3 months ago by benformatics 3.5k
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2
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1.1k
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Comment: Comment: How to find rna strand direction before alignment?
3 months ago by benformatics 3.5k
1
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0
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398
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Answer: Answer: Does anyone have experience using findtail?
3 months ago by benformatics 3.5k
1
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0
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1.1k
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Answer: Answer: How to find rna strand direction before alignment?
3 months ago by benformatics 3.5k
1
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0
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166
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Answer: Answer: comparison of conditions scRNA-seq
3 months ago by benformatics 3.5k
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1
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4.9k
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Comment: Comment: CPM or TPM in GSEA analysis
3 months ago by benformatics 3.5k
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1
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4.9k
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Comment: Comment: CPM or TPM in GSEA analysis
3 months ago by benformatics 3.5k
1
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1
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510
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Answer: Answer: Treating "patient" as a batch effect
4 months ago by benformatics 3.5k
0
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1
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451
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Comment: Comment: Proportion of mitochondrial reads atac seq
4 months ago by benformatics 3.5k
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2
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451
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Answer: Answer: Proportion of mitochondrial reads atac seq
4 months ago by benformatics 3.5k
1
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0
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279
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Answer: Answer: PolyA Tail Detection in RNA-seq data
4 months ago by benformatics 3.5k
1
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1
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272
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Answer: Answer: Extract list of mapped UMIs in cell ranger output
4 months ago by benformatics 3.5k
0
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0
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310
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Answer: Answer: How to get the canonical transcript from gene ensemble ID
4 months ago by benformatics 3.5k
2
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1
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231
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Answer: Answer: Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
4 months ago by benformatics 3.5k
3
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0
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1.4k
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Answer: Answer: Does a PhD or work experience set you up better to do bioinformatics work in ind
4 months ago by benformatics 3.5k
0
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1
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361
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Answer: Answer: How to convert trinotate results into GFF3
4 months ago by benformatics 3.5k
1
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1
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422
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Answer: Answer: How to tell if GEO SRA is paired or single?
4 months ago by benformatics 3.5k
0
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0
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578
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Comment: Comment: How much RAM for scRNAseq 200K cells?
4 months ago by benformatics 3.5k
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0
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564
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Comment: Comment: scRNA-Seq datasets with labels
4 months ago by benformatics 3.5k
1
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0
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593
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Answer: Answer: Which Bioinformatics Master's degree is better?
4 months ago by benformatics 3.5k
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0
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284
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Answer: Answer: Protein sequence from a gene fusion?
5 months ago by benformatics 3.5k
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1
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320
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Comment: Comment: Does chemistry have significant effects on my single nucleus dataset?
5 months ago by benformatics 3.5k
430 results • Page 1 of 9
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