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Answer: Answer: ATAC-seq fragment size distribution - huge spike at 150 bp
3.7 years ago by benformatics 4.2k
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1.3k
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Answer: Answer: Is there a tool available to check a Tm for a DNA fragment or sequence?
3.7 years ago by benformatics 4.2k
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3.3k
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Comment: Comment: What do we call a transcript?
3.7 years ago by benformatics 4.2k
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3.3k
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Comment: Comment: What do we call a transcript?
3.7 years ago by benformatics 4.2k
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2.5k
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Answer: Answer: understanding how cutadapt trims
3.7 years ago by benformatics 4.2k
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2
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2.5k
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Comment: Comment: understanding how cutadapt trims
3.7 years ago by benformatics 4.2k
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1.4k
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Answer: Answer: Output splicing for alignment with gff or gtf
3.7 years ago by benformatics 4.2k
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859
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Comment: Comment: Validating splice site using protein sequence
3.8 years ago by benformatics 4.2k
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12k
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Answer: Answer: Adding optional tags to a BAM file
3.8 years ago by benformatics 4.2k
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1.2k
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Comment: Comment: Are there Batch effect among different samples?
4.0 years ago by benformatics 4.2k
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1.5k
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Comment: Comment: How should I deal with my RNAseq result with high % of mutiple aligned reads?
4.0 years ago by benformatics 4.2k
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2
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2.1k
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EBI European Nucleotide Archive (ERA) aspera access broken
elixir ebi ena
updated 4.0 years ago by 22k • written 4.0 years ago by 4.2k
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3.1k
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Comment: Comment: Data Manipulation
4.1 years ago by benformatics 4.2k
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3.1k
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Comment: Comment: Data Manipulation
4.1 years ago by benformatics 4.2k
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3
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3.1k
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Answer: Answer: Data Manipulation
4.1 years ago by benformatics 4.2k
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1
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1.1k
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Comment: Comment: GC bias in small RNA-seq data
4.1 years ago by benformatics 4.2k
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3.1k
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Answer: Answer: How to quantify piRNAs ?
4.1 years ago by benformatics 4.2k
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1.0k
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Comment: Comment: Mark duplicates the bam files sorted by coordinates
4.1 years ago by benformatics 4.2k
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1.4k
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Comment: Comment: Germline Cancer Mutations
4.2 years ago by benformatics 4.2k
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1.4k
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Answer: Answer: Germline Cancer Mutations
4.2 years ago by benformatics 4.2k
2
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1
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3.1k
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Answer: Answer: Good or bad idea to annotate with newer genome build?
4.2 years ago by benformatics 4.2k
2
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1.3k
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Answer: Answer: R package for structural variation representation ?
4.2 years ago by benformatics 4.2k
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1
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1.9k
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Comment: Comment: TMM normalization and sex effect
4.2 years ago by benformatics 4.2k
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1.0k
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Comment: Comment: Weird 8bp peak in (clean) small RNA data
4.2 years ago by benformatics 4.2k
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2.3k
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Comment: Comment: Mapping unique GO term description given a specific GO id
4.2 years ago by benformatics 4.2k
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0
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6.0k
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Answer: Answer: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
4.2 years ago by benformatics 4.2k
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1
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1.7k
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Comment: Comment: convert genomic bigWig file to transcriptome space
4.2 years ago by benformatics 4.2k
1
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1
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1.7k
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Comment: Comment: convert genomic bigWig file to transcriptome space
4.2 years ago by benformatics 4.2k
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1
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7.4k
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Comment: Comment: How to solve duplicate rownames error on R
4.2 years ago by benformatics 4.2k
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1
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7.4k
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Answer: Answer: How to solve duplicate rownames error on R
4.2 years ago by benformatics 4.2k
3
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4.8k
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Answer: Answer: Is it possible to count lines of fastq.gz file in R ?
4.2 years ago by benformatics 4.2k
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0
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4.8k
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Comment: Comment: Is it possible to count lines of fastq.gz file in R ?
4.2 years ago by benformatics 4.2k
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1
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4.8k
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Answer: Answer: Is it possible to count lines of fastq.gz file in R ?
4.2 years ago by benformatics 4.2k
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1
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2.3k
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Answer: Answer: Mapping unique GO term description given a specific GO id
4.2 years ago by benformatics 4.2k
0
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1
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2.0k
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Comment: Comment: should barcode in scRNAseq be deleted when demultiplexing
4.2 years ago by benformatics 4.2k
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1
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2.0k
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Answer: Answer: should barcode in scRNAseq be deleted when demultiplexing
4.2 years ago by benformatics 4.2k
0
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0
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2.4k
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Comment: Comment: STAR vs Novoalign IGV Browser visualization
4.2 years ago by benformatics 4.2k
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2
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2.4k
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Comment: Comment: STAR vs Novoalign IGV Browser visualization
4.2 years ago by benformatics 4.2k
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0
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1.5k
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Comment: Comment: Whole exome seuqencing capture sequence
4.2 years ago by benformatics 4.2k
2
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1
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4.3k
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Answer: Answer: Filtering lowly expressed genes
4.2 years ago by benformatics 4.2k
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1
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2.6k
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Comment: Comment: DESeq2 analysis result differences
4.2 years ago by benformatics 4.2k
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1
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4.0k
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Comment: Comment: Converting mouse Gene IDs to Human while keeping genes that don't convert
4.2 years ago by benformatics 4.2k
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1.9k
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Answer: Answer: Problems with fragment length distribution output with Salmon
4.2 years ago by benformatics 4.2k
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5.2k
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Answer: Answer: R Programming
4.2 years ago by benformatics 4.2k
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0
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3.0k
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Comment: Comment: analyzing cel files
4.3 years ago by benformatics 4.2k
1
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1
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3.5k
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Answer: Answer: Strand specific quantification with strand-splitted BAM files
4.3 years ago by benformatics 4.2k
1
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1
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3.3k
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Comment: Comment: Error when using UpSetR package
4.3 years ago by benformatics 4.2k
4
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1
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3.3k
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Answer: Answer: Error when using UpSetR package
4.3 years ago by benformatics 4.2k
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0
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2.5k
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Comment: Comment: cellranger count aggregated to transcripts
4.3 years ago by benformatics 4.2k
0
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0
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1.4k
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Answer: Answer: Gene prediction methods
4.3 years ago by benformatics 4.2k
503 results • Page 5 of 11
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