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Comment:
C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
3.4 years ago by
benformatics
3.9k
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0
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1.2k
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Comment:
C: Is ENA API down?
3.5 years ago by
benformatics
3.9k
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0
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1.0k
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Comment:
C: Get all rows matching to list
3.5 years ago by
benformatics
3.9k
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1
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3.6k
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Comment:
C: Why should ATAC-seq mapped reads be shifted +4 and -5 for +strand and -strand, r
3.5 years ago by
benformatics
3.9k
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1
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3.2k
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Comment:
C: Does trimming RNA-Seq reads affect the differentially expressed genes?
3.6 years ago by
benformatics
3.9k
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1
reply
4.9k
views
Comment:
C: Issue installing rmats using conda
3.6 years ago by
benformatics
3.9k
0
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0
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1.9k
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Comment:
C: key lookup changes with AnnotationDbi version
3.6 years ago by
benformatics
3.9k
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0
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1.4k
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Comment:
C: How to identify mRNA 3' UTR by bulk RNA-seq data
3.6 years ago by
benformatics
3.9k
1
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1
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4.9k
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Comment:
C: Issue installing rmats using conda
3.6 years ago by
benformatics
3.9k
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1.6k
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Comment:
C: Preventing alignment to new Splice Junctions with STAR
3.6 years ago by
benformatics
3.9k
1
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0
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3.2k
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Comment:
C: Does trimming RNA-Seq reads affect the differentially expressed genes?
3.6 years ago by
benformatics
3.9k
0
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0
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6.8k
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Comment:
C: bed file indexing problem
3.6 years ago by
benformatics
3.9k
0
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1
reply
2.6k
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Comment:
C: STAR index file for GRCH37
3.6 years ago by
benformatics
3.9k
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2.6k
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Comment:
C: STAR index file for GRCH37
3.6 years ago by
benformatics
3.9k
1
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1
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2.6k
views
Comment:
C: STAR index file for GRCH37
3.6 years ago by
benformatics
3.9k
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894
views
Comment:
C: findOverlapofPeaks discrepancy in peaklist vs Venn diagram
3.7 years ago by
benformatics
3.9k
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0
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2.3k
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Comment:
C: genomeGenerate: exiting because of *OUTPUT FILE* error: could not create output
3.7 years ago by
benformatics
3.9k
4
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56k
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Comment:
Comment: How To Write Data In A Granges Object To A Bed File.
2.2 years ago by
benformatics
3.9k
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1.4k
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Comment:
C: Collapse mapped reads in sorted bam file based on the start and end position coo
3.8 years ago by
benformatics
3.9k
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808
views
Comment:
C: bowtie2 alignment summary and mapping problems
3.8 years ago by
benformatics
3.9k
0
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0
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1.1k
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Comment:
C: Exome variants limited only to the first half of a gene? Technical error?
3.8 years ago by
benformatics
3.9k
1
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0
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1.1k
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Comment:
C: Exome variants limited only to the first half of a gene? Technical error?
3.8 years ago by
benformatics
3.9k
1
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1.3k
views
Comment:
C: Trimmomatic on NEBNext Ultra II FS DNA
3.8 years ago by
benformatics
3.9k
2
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1
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1.1k
views
Comment:
C: Exome variants limited only to the first half of a gene? Technical error?
3.8 years ago by
benformatics
3.9k
0
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0
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2.2k
views
Comment:
C: GFF3 to GTF problems
3.8 years ago by
benformatics
3.9k
0
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1
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2.6k
views
Comment:
C: star --readFilesIn error when using unmapped.out.mate1/2 files
3.8 years ago by
benformatics
3.9k
0
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0
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913
views
Comment:
C: How to extract 5'UTR sequences by TSS coordinates?
3.8 years ago by
benformatics
3.9k
1
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0
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3.3k
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Comment:
C: How to properly analyze many RDS files in Bioconductor
3.8 years ago by
benformatics
3.9k
1
vote
2
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3.3k
views
Comment:
C: How to properly analyze many RDS files in Bioconductor
3.8 years ago by
benformatics
3.9k
1
vote
1
reply
3.3k
views
Comment:
C: Get the location of a promoter from a gene
3.8 years ago by
benformatics
3.9k
2
votes
1
reply
3.3k
views
Comment:
C: Get the location of a promoter from a gene
3.8 years ago by
benformatics
3.9k
0
votes
1
reply
1.6k
views
Comment:
C: Different barcodes on demultiplexed data
3.8 years ago by
benformatics
3.9k
1
vote
0
replies
727
views
Comment:
C: How to mass identify the given miRNA sequences?
3.8 years ago by
benformatics
3.9k
0
votes
1
reply
56k
views
Comment:
Comment: How To Write Data In A Granges Object To A Bed File.
2.2 years ago by
benformatics
3.9k
1
vote
0
replies
5.6k
views
Comment:
C: Is removing rRNA a necessary step in RNA-seq?
3.8 years ago by
benformatics
3.9k
0
votes
1
reply
5.6k
views
Comment:
C: Is removing rRNA a necessary step in RNA-seq?
3.8 years ago by
benformatics
3.9k
1
vote
1
reply
3.5k
views
Comment:
C: Correlate ChIP-seq to gene expression
3.9 years ago by
benformatics
3.9k
0
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0
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1.1k
views
Comment:
C: Extracting Unmapped Reads from BAM files using Rsamtools
3.9 years ago by
benformatics
3.9k
0
votes
0
replies
1.4k
views
Comment:
C: Specifying unequal replicates in deseq2 with htseq-count input
3.9 years ago by
benformatics
3.9k
0
votes
2
replies
1.1k
views
Comment:
C: Order assignment given family and genus level in R
4.0 years ago by
benformatics
3.9k
0
votes
1
reply
935
views
Comment:
C: filter_vep not properly filtering
4.0 years ago by
benformatics
3.9k
0
votes
1
reply
2.4k
views
Comment:
C: How to quickly tell the reference allele given chr, pos, A1 and A2 allele?
4.0 years ago by
benformatics
3.9k
0
votes
1
reply
2.1k
views
Comment:
C: GGplot2 coord flip problem
4.1 years ago by
benformatics
3.9k
0
votes
1
reply
2.2k
views
Comment:
C: Finding the Refseq Soft-masked Regions
4.1 years ago by
benformatics
3.9k
2
votes
2
replies
1.0k
views
Comment:
C: Whole intron deletion?
4.2 years ago by
benformatics
3.9k
1
vote
1
reply
1.4k
views
Comment:
C: VCF files - how to handle entries with identical ID but different positions and
4.2 years ago by
benformatics
3.9k
0
votes
0
replies
1.8k
views
Comment:
C: Non-overlapping exon set for exon counting (Illumina RNA-seq)
4.2 years ago by
benformatics
3.9k
0
votes
0
replies
1.7k
views
Comment:
C: Per base sequence content: "A" underrepresented
4.2 years ago by
benformatics
3.9k
0
votes
1
reply
2.2k
views
Comment:
C: Transcript length distribution plot, based on genome + annotation
4.2 years ago by
benformatics
3.9k
0
votes
1
reply
1.1k
views
Comment:
C: Question about scRNA-seq analysis
4.2 years ago by
benformatics
3.9k
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